RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 C18orf21Q32NC0 220 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NADSYN1Q6IA69 706 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ERMP1Q7Z2K6 904 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ERI1Q8IV48 349 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TEX47Q8TBZ9 253 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HEPHQ9BQS7 1158 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZFP57Q9NU63 452 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SCML2Q9UQR0 700 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NDUFAF1Q9Y375 327 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CHD9Q3L8U1 2897 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 USP34Q70CQ2 3546 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CDC7O00311 574 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SEC24AO95486 1093 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CD46P15529 392 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 IMPDH1P20839 514 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ALDH3B2P48448 385 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ESRRGP62508 458 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SCARB2Q14108 478 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RAB39AQ14964 217 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 KRT74Q7RTS7 529 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 AFAP1L2Q8N4X5 818 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HUS1BQ8NHY5 278 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZUFSPQ96AP4 578 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SLC30A3Q99726 388 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PLK2Q9NYY3 685 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 AASSQ9UDR5 926 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 VPS51Q9UID3 782 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MYO16Q9Y6X6 1858 aa11.34□□□□□ -0.59
CDK5RAP3-231ENST00000584063 AREL1O15033 823 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CXCL10P02778 98 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PF4V1P10720 104 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SYN1P17600 705 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 FASP25445 335 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MAPK8P45983 427 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LEPRP48357 1165 aaKnown RBP11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MTPNP58546 118 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RPL26P61254 145 aaKnown RBP11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CD300CQ08708 224 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CRIPAKQ8N1N5 446 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HDAC2Q92769 488 aaKnown RBP11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TOP1MTQ969P6 601 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LRRC58Q96CX6 371 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ITCHQ96J02 903 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ART5Q96L15 291 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UBXN10Q96LJ8 280 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CLSTN3Q9BQT9 956 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZYG11BQ9C0D3 744 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 BPIFA1Q9NP55 256 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UTS2RQ9UKP6 389 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CACNG2Q9Y698 323 aa11.33□□□□□ -0.59
CDK5RAP3-231ENST00000584063 IQCF5A8MTL0 148 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PSMD11O00231 422 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 AZIN1O14977 448 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SHOXO15266 292 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LILRB5O75023 590 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZBTB11O95625 1053 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RBP1P09455 135 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GSK3BP49841 420 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TSNQ15631 228 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PAQR3Q6TCH7 311 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZC3H7AQ8IWR0 971 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CCDC36Q8IYA8 594 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MIER2Q8N344 545 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PCYOX1LQ8NBM8 494 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZNF558Q96NG5 402 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CWH43Q9H720 699 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ENOPH1Q9UHY7 261 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC38A8A6NNN8 435 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PDPK1O15530 556 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PSMD3O43242 534 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NOBOXO60393 691 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GJB5O95377 273 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 IL7RP16871 459 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 POLR2CP19387 275 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR1E1P30953 314 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SGSHP51688 502 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DGKQP52824 942 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ACAP2Q15057 778 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TIGD7Q6NT04 549 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GPR180Q86V85 440 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CDH26Q8IXH8 852 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CLYBLQ8N0X4 340 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ANKFN1Q8N957 763 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PDZD8Q8NEN9 1154 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms