RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	ADRA1D	P25100	572 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	PSMB5	P28074	263 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	GCGR	P47871	477 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	OR1D4	P47884	311 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	ARSF	P54793	590 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	TMED2	Q15363	201 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	NKG7	Q16617	165 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	PRAMEF13	Q5VWM6	474 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	FIGLA	Q6QHK4	219 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	PARP9	Q8IXQ6	854 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	TTC29	Q8NA56	475 aa	Predicted RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	OR2L8	Q8NGY9	312 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	SKA2	Q8WVK7	121 aa	Predicted RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	ASZ1	Q8WWH4	475 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	FKBP10	Q96AY3	582 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	CNDP1	Q96KN2	507 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	SPSB2	Q99619	263 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	WDR77	Q9BQA1	342 aa	Predicted RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	SELENOS	Q9BQE4	189 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	CARD6	Q9BX69	1037 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	CATSPERZ	Q9NTU4	200 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	CTSF	Q9UBX1	484 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	NOVA2	Q9UNW9	492 aa	Known RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	RUVBL2	Q9Y230	463 aa	Known RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	MAU2	Q9Y6X3	613 aa		14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	RP1L1	Q8IWN7	2480 aa	Predicted RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	PRRC2C	Q9Y520	2896 aa	Known RBP	14.52	□□□□□ -0.09
SREBF1-222	ENST00000583732	ERI2	A8K979	691 aa	Known RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	RASGRF2	O14827	1237 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	LIAS	O43766	372 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	GPC4	O75487	556 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	SUN1	O94901	812 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	S1PR4	O95977	384 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	PIM1	P11309	404 aa	Predicted RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	MMP11	P24347	488 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	FDFT1	P37268	417 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	DCT	P40126	519 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	SOX8	P57073	446 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	KIF5A	Q12840	1032 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	SNX1	Q13596	522 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	RBBP7	Q16576	425 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	CCSMST1	Q4G0I0	132 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	CRB2	Q5IJ48	1285 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	SEL1L2	Q5TEA6	688 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	IRAK1BP1	Q5VVH5	260 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	PTRHD1	Q6GMV3	140 aa	Known RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	UNC5D	Q6UXZ4	953 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	OVCH1	Q7RTY7	1134 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	PRSS58	Q8IYP2	241 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	PPHLN1	Q8NEY8	458 aa	Known RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	UBE2Q2	Q8WVN8	375 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	C1orf54	Q8WWF1	131 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	SLC22A18	Q96BI1	424 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	MRFAP1L1	Q96HT8	127 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	RAB6B	Q9NRW1	208 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	MARCH4	Q9P2E8	410 aa	Predicted RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	ANAPC5	Q9UJX4	755 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	ZNF148	Q9UQR1	794 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	HS3ST3B1	Q9Y662	390 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	NFS1	Q9Y697	457 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	CAPN6	Q9Y6Q1	641 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	MDC1	Q14676	2089 aa	Known RBP	14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	CROCC	Q5TZA2	2017 aa		14.51	□□□□□ -0.09
SREBF1-222	ENST00000583732	NRP2	O60462	931 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	AOAH	P28039	575 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	PPARG	P37231	505 aa	Predicted RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	VSX2	P58304	361 aa	Predicted RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	ACVR1	Q04771	509 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	GRM7	Q14831	915 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	OASL	Q15646	514 aa	Known RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	TUBB8	Q3ZCM7	444 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	ZC3H12B	Q5HYM0	836 aa	Known RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	AARS2	Q5JTZ9	985 aa	Known RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	OTUD6B	Q8N6M0	293 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	GSDMB	Q8TAX9	411 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	MIPEP	Q99797	713 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	BAG1	Q99933	345 aa	Predicted RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	MESP1	Q9BRJ9	268 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	WDR54	Q9H977	334 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	AGPAT4	Q9NRZ5	378 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	STOX2	Q9P2F5	926 aa	Predicted RBP	14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732	RIMKLB	Q9ULI2	386 aa		14.5	□□□□□ -0.09
SREBF1-222	ENST00000583732		A0A0J9YVX5	310 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	PRMT5	O14744	637 aa	Predicted RBP	14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	CTSV	O60911	334 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	MED26	O95402	600 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	ALB	P02768	609 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	APRT	P07741	180 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	SESN2	P58004	480 aa	Predicted RBP	14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	CRADD	P78560	199 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	CDC16	Q13042	620 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	TCTE1	Q5JU00	501 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	AGAP7P	Q5VUJ5	663 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	FRMPD2B	Q6IN97	320 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	TTC23L	Q6PF05	361 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	CNST	Q6PJW8	725 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	KIRREL2	Q6UWL6	708 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	LINC00696	Q6ZRV3	163 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	NLRP9	Q7RTR0	991 aa		14.49	□□□□□ -0.09
SREBF1-222	ENST00000583732	DNAJB14	Q8TBM8	379 aa		14.49	□□□□□ -0.09

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms