RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SQLEQ14534 574 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 TAF13Q15543 124 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 XKR3Q5GH77 459 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 DCLRE1AQ6PJP8 1040 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 SH2D5Q6ZV89 423 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 USP43Q70EL4 1123 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 METTL23Q86XA0 190 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 OR4K1Q8NGD4 311 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 DNASE2BQ8WZ79 361 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM71F1Q96KD3 344 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 EGFL8Q99944 293 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 FERMT1Q9BQL6 677 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 FN3KQ9H479 309 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 A0A087WYN8 130 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 A0A0G2JLW4 131 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 A0A1W2PRQ8 180 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 ANXA2P2A6NMY6 339 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM72CH0Y354 149 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 CD48P09326 243 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 TCF4P15884 667 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 RPL21P46778 160 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 GPR17Q13304 367 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 C6orf136Q5SQH8 315 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM72AQ5TYM5 149 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 ARHGEF16Q5VV41 709 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM72DQ6L9T8 149 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 C11orf57Q6ZUT1 292 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 SLC16A9Q7RTY1 509 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 KRT77Q7Z794 578 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM72BQ86X60 149 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 KCNE4Q8WWG9 221 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 PROX1Q92786 737 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 SPATA33Q96N06 139 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 PGLYRP2Q96PD5 576 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 CCDC3Q9BQI4 270 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 FGF21Q9NSA1 209 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 TXNDC16Q9P2K2 825 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 STUB1Q9UNE7 303 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 KCNJ14Q9UNX9 436 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 TRIM17Q9Y577 477 aa5.07□□□□□ -1.6
SMARCE1-219ENST00000583294 TRAV34A0A0B4J273 112 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 DDHD2O94830 711 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 PLA2G4BP0C869 781 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 ERVK-10P10266 1014 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 EPCAMP16422 314 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 ACAT1P24752 427 aaKnown RBP5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 CD27P26842 260 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 MAP2K2P36507 400 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 BMXP51813 675 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 GSDMDP57764 484 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 CDR2Q01850 454 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 GCNT1Q02742 428 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 RRS1Q15050 365 aaKnown RBP5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 NPTX1Q15818 432 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 KIAA1644Q3SXP7 199 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 ENPP7Q6UWV6 458 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 SPATA21Q7Z572 469 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 ABI3BPQ7Z7G0 1075 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 CNBD1Q8NA66 436 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 GRAPLQ8TC17 118 aaPredicted RBP5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 NSMAFQ92636 917 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 Q9H8V8 135 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM207AQ9NSI2 230 aaPredicted RBP5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 INTS9Q9NV88 658 aaKnown RBP5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 P4HTMQ9NXG6 502 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 TNNQ9UQP3 1299 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 C2CD2Q9Y426 696 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 POMT1Q9Y6A1 747 aa5.06□□□□□ -1.6
SMARCE1-219ENST00000583294 STK36Q9NRP7 1315 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 CASTOR2A6NHX0 329 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 C2orf81A6NN90 581 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 PRR23D1E9PI22 279 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM86B1E9PN63 330 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 BLOC1S5-TXNDC5H3BN57 136 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 CCDC188H7C350 402 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 ARPC2O15144 300 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 RPS6KA5O75582 802 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 GBAP04062 536 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 FAM86B2P0C5J1 330 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 PRR23D2P0DMB1 279 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 IGHV4-31P0DP07 118 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 DARSP14868 501 aaKnown RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 CA6P23280 308 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 ITGA3P26006 1051 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 NKX2-1P43699 371 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 IRX6P78412 446 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 ROR1Q01973 937 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 HERC3Q15034 1050 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 P2RY6Q15077 328 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 NONOQ15233 471 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 PHKG1Q16816 387 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 GTDC1Q4AE62 458 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 LACTB2Q53H82 288 aaPredicted RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 OR52N5Q8NH56 324 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 THUMPD3Q9BV44 507 aaKnown RBP5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 OR2B2Q9GZK3 357 aa5.05□□□□□ -1.6
SMARCE1-219ENST00000583294 TLE6Q9H808 572 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms