RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MAGP20916 626 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 SAT1P21673 171 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 STAT5AP42229 794 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 ABHD18Q0P651 414 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 ZIC1Q15915 447 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 LRRC8EQ6NSJ5 796 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 PAQR3Q6TCH7 311 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 UBE2R2Q712K3 238 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 SLC26A11Q86WA9 606 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 MYO1HQ8N1T3 1032 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 MMGT1Q8N4V1 131 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 NOA1Q8NC60 698 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 OR1L3Q8NH93 324 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 DENND1AQ8TEH3 1009 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 EEF1AKMT1Q8WVE0 214 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 ASB11Q8WXH4 323 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 CDKL2Q92772 493 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 PKP4Q99569 1192 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 SLC7A5P2Q9GIP4 190 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 TWSG1Q9GZX9 223 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 INTS7Q9NVH2 962 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 TXNDC16Q9P2K2 825 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 SERTAD3Q9UJW9 196 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 PSAT1Q9Y617 370 aa12.15□□□□□ -0.46
SMARCE1-218ENST00000582955 ZNF839A8K0R7 811 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 MYO1CO00159 1063 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 CPNE3O75131 537 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 PIAS1O75925 651 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 MSL3P1P0C860 447 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 PSMB5P28074 263 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 MAGEA4P43358 317 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 PGGT1BP53609 377 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 ITGA1P56199 1179 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 FASTKQ14296 549 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 CYP2A13Q16696 494 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 C3orf62Q6ZUJ4 267 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 ZC3HC1Q86WB0 502 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 SYTL1Q8IYJ3 562 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 GPR135Q8IZ08 494 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 HMGCLL1Q8TB92 370 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 OLFM1Q99784 485 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 MIPEPQ99797 713 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 EFHD1Q9BUP0 239 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 ACAT2Q9BWD1 397 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 SMYD2Q9NRG4 433 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 ABCF3Q9NUQ8 709 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 PADI1Q9ULC6 663 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 ITPR1Q14643 2758 aa12.14□□□□□ -0.47
SMARCE1-218ENST00000582955 FAM95CA0A1B0GW59 222 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PABPN1LA6NDY0 278 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 E7EQ34 232 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 GFYI3L273 518 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PRICKLE3O43900 615 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 OR2B3O76000 313 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC16A8O95907 504 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 C8GP07360 202 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 GSTA2P09210 222 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 FDXRP22570 491 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 RPA3P35244 121 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 DLSTP36957 453 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 HSD17B2P37059 387 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PNLIPRP1P54315 467 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 IL2P60568 153 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 ARHGAP19Q14CB8 494 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PRAMEF17Q5VTA0 474 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 KIAA1614Q5VZ46 1190 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 FIGLAQ6QHK4 219 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 SUSD1Q6UWL2 747 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 CEP112Q8N8E3 955 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 FBXO15Q8NCQ5 510 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 OR2L3Q8NG85 312 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 SNRNP27Q8WVK2 155 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 SMPDL3AQ92484 453 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 RHOJQ9H4E5 214 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 LHX9Q9NQ69 397 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 ADAMTS6Q9UKP5 1117 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 PCDHB3Q9Y5E6 796 aa12.13□□□□□ -0.47
SMARCE1-218ENST00000582955 A0A1W2PPV9 198 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 CXorf49A8MYA2 514 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 ZNF749O43361 778 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 HCRTR1O43613 425 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 KATNA1O75449 491 aa12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 SNRNP200O75643 2136 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-218ENST00000582955 FKBP9O95302 570 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms