RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FKBP9O95302 570 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 RPN2P04844 631 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 PPARGP37231 505 aaPredicted RBP10.17□□□□□ -0.78
RFFL-209ENST00000581265 GLRBP48167 497 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 NKG7Q16617 165 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 ZC3H12BQ5HYM0 836 aaKnown RBP10.17□□□□□ -0.78
RFFL-209ENST00000581265 TCTE1Q5JU00 501 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 PRAMEF13Q5VWM6 474 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 FCRL6Q6DN72 434 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 AFTPHQ6ULP2 937 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 KIRREL2Q6UWL6 708 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 IGFL2Q6UWQ7 119 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 UNC5DQ6UXZ4 953 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 ZNF534Q76KX8 674 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 VRK3Q8IV63 474 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 DCUN1D3Q8IWE4 304 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 TAB3Q8N5C8 712 aaPredicted RBP10.17□□□□□ -0.78
RFFL-209ENST00000581265 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.17□□□□□ -0.78
RFFL-209ENST00000581265 OR6P1Q8NGX9 317 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 OR2L8Q8NGY9 312 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 ZUFSPQ96AP4 578 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 ZNF778Q96MU6 729 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 SPSB2Q99619 263 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 TSSK1BQ9BXA7 367 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 ETNK1Q9HBU6 452 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 AGPAT4Q9NRZ5 378 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 INTS7Q9NVH2 962 aaKnown RBP10.17□□□□□ -0.78
RFFL-209ENST00000581265 IL1RAPL1Q9NZN1 696 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 SLC2A6Q9UGQ3 507 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 NTNG1Q9Y2I2 539 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 KLHL20Q9Y2M5 609 aa10.17□□□□□ -0.78
RFFL-209ENST00000581265 DIDO1Q9BTC0 2240 aaKnown RBP10.17□□□□□ -0.78
RFFL-209ENST00000581265 FITM1A5D6W6 292 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 TARM1B6A8C7 271 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 SOCS6O14544 535 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 DSCR3O14972 297 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 SRPX2O60687 465 aaPredicted RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 APOA4P06727 396 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 ITGA3P26006 1051 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 AOAHP28039 575 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 FDFT1P37268 417 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 GRIA1P42261 906 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 GRIA3P42263 894 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 ZNF75DP51815 510 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 CSE1LP55060 971 aaKnown RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 GRM7Q14831 915 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 SF1Q15637 639 aaKnown RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 FAM214AQ32MH5 1076 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 FASTKD1Q53R41 847 aaKnown RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 AGAP7PQ5VUJ5 663 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 FIGLAQ6QHK4 219 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 LMNTD1Q8N9Z9 388 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 ST6GALNAC3Q8NDV1 305 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 ACRBPQ8NEB7 543 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 PPP4R1Q8TF05 950 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 COG1Q8WTW3 980 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 MRFAP1L1Q96HT8 127 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 HES6Q96HZ4 224 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 AGAP4Q96P64 663 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 WDR77Q9BQA1 342 aaPredicted RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 FRMD8P1Q9BZ68 369 aaPredicted RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 MRM3Q9HC36 420 aaKnown RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 SLC6A20Q9NP91 592 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 CUTCQ9NTM9 273 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 CDC23Q9UJX2 597 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 FBXL4Q9UKA2 621 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 NXT1Q9UKK6 140 aaKnown RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 PACSIN2Q9UNF0 486 aaPredicted RBP10.16□□□□□ -0.78
RFFL-209ENST00000581265 KLK4Q9Y5K2 254 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 HS3ST3B1Q9Y662 390 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 LRBAP50851 2863 aa10.16□□□□□ -0.78
RFFL-209ENST00000581265 VSTM2BA6NLU5 285 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 IQCF5A8MTL0 148 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 PRMT5O14744 637 aaPredicted RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 RASGRF2O14827 1237 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 LIASO43766 372 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 TSFMP43897 325 aaKnown RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 PRAMEP78395 509 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 KIF5AQ12840 1032 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 SEMA3AQ14563 771 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 OASLQ15646 514 aaKnown RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 HIF1AQ16665 826 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 ZXDCQ2QGD7 858 aaPredicted RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 AARS2Q5JTZ9 985 aaKnown RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 IRAK1BP1Q5VVH5 260 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 TTC23LQ6PF05 361 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 PPP1R21Q6ZMI0 780 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 COX15Q7KZN9 410 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 KIAA1328Q86T90 577 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 KCNMB4Q86W47 210 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 MCEMP1Q8IX19 187 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 C2orf73Q8N5S3 287 aaPredicted RBP10.15□□□□□ -0.78
RFFL-209ENST00000581265 OR11G2Q8NGC1 345 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 CFAP61Q8NHU2 1237 aa10.15□□□□□ -0.78
RFFL-209ENST00000581265 HMGCLL1Q8TB92 370 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms