RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 A0A0U1RQJ8 604 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 DSCR3O14972 297 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 HCRTR1O43613 425 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 SRPX2O60687 465 aaPredicted RBP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 DDAH2O95865 285 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 ETS1P14921 441 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 MMP11P24347 488 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 ITGA3P26006 1051 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 CDK16Q00536 496 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 ELOAQ14241 798 aaKnown RBP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 SEMA3AQ14563 771 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 OVCH1Q7RTY7 1134 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 TAX1BP1Q86VP1 789 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 VRK3Q8IV63 474 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 KRT222Q8N1A0 295 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 C2orf73Q8N5S3 287 aaPredicted RBP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 Q8NA96 180 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 LKAAEAR1Q8TD35 194 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 SELENOSQ9BQE4 189 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 MENTQ9BUN1 341 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 HOMER3Q9NSC5 361 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
PGAP3-207ENST00000580898 TTC7AQ9ULT0 858 aaPredicted RBP13.04□□□□□ -0.32
PGAP3-207ENST00000580898 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 ONECUT2O95948 504 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 ERVK-10P10266 1014 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 PAMP19021 973 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 RPL22P35268 128 aaKnown RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 PPP1R32Q7Z5V6 425 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 LDB1Q86U70 411 aaPredicted RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 FAM20CQ8IXL6 584 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 LMNTD1Q8N9Z9 388 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 HMGCLL1Q8TB92 370 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 IL17FQ96PD4 163 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 TCF12Q99081 682 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 P2RY12Q9H244 342 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 SLC26A1Q9H2B4 701 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 SEMA3GQ9NS98 782 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 TREX1Q9NSU2 369 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 PLEKHB1Q9UF11 243 aaPredicted RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 VPS9D1Q9Y2B5 631 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 KLHL20Q9Y2M5 609 aa13.03□□□□□ -0.32
PGAP3-207ENST00000580898 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
PGAP3-207ENST00000580898 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 ZNF839A8K0R7 811 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PHF2O75151 1096 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 C1orf105O95561 183 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 ESR1P03372 595 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 UMODP07911 640 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 ATP5DP30049 168 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 CMPK1P30085 196 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 GCGRP47871 477 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 OCA2Q04671 838 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 GRB7Q14451 532 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 RBBP7Q16576 425 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 TUBB8Q3ZCM7 444 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRR30Q53SZ7 412 aaPredicted RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRAMEF13Q5VWM6 474 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 FCRL6Q6DN72 434 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRMT9Q6P2P2 845 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PRR7Q8TB68 274 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 SNRNP40Q96DI7 357 aaKnown RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 EPS8L2Q9H6S3 715 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 ENAMQ9NRM1 1142 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 FAM114A2Q9NRY5 505 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 MARCH4Q9P2E8 410 aaPredicted RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 CIDEBQ9UHD4 219 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 KLK4Q9Y5K2 254 aa13.02□□□□□ -0.33
PGAP3-207ENST00000580898 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.33
PGAP3-207ENST00000580898 PIKFYVEQ9Y2I7 2098 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 RELNP78509 3460 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 FITM1A5D6W6 292 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 E5RI56 91 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 NRDCO43847 1150 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 CNOT3O75175 753 aaKnown RBP13.01□□□□□ -0.33
PGAP3-207ENST00000580898 VPS26AO75436 327 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 VAPBO95292 243 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 FGGP02679 453 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 CTSBP07858 339 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 CCDC175P0C221 793 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 TPSB2P20231 275 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 OGNP20774 298 aaKnown RBP13.01□□□□□ -0.33
PGAP3-207ENST00000580898 NMBRP28336 390 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 GRIA3P42263 894 aa13.01□□□□□ -0.33
PGAP3-207ENST00000580898 BDKRB1P46663 353 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms