RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 LEXMQ3ZCV2 418 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 IRAK1BP1Q5VVH5 260 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 XKR5Q6UX68 686 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 C11orf96Q7Z7L8 435 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 SATL1Q86VE3 508 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 PGBD3Q8N328 593 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 SNX31Q8N9S9 440 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 UBTD2Q8WUN7 234 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 DUS3LQ96G46 650 aaKnown RBP19.7■□□□□ 0.74
SMG8-203ENST00000578922 TEX101Q9BY14 249 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 AKTIPQ9H8T0 292 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 ZNHIT2Q9UHR6 403 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 GPR34Q9UPC5 381 aa19.7■□□□□ 0.74
SMG8-203ENST00000578922 ZFC3H1O60293 1989 aaKnown RBP19.69■□□□□ 0.74
SMG8-203ENST00000578922 PSIP1O75475 530 aaKnown RBP19.69■□□□□ 0.74
SMG8-203ENST00000578922 ITPKAP23677 461 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 IGFALSP35858 605 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 PIK3CGP48736 1102 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 TPMTP51580 245 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 TRAF3Q13114 568 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 MAP7Q14244 749 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 AGERQ15109 404 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 ADRM1Q16186 407 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 PTCHD3Q3KNS1 767 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 GK5Q6ZS86 529 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 MILR1Q7Z6M3 343 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 METTL6Q8TCB7 284 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 DTNBP1Q96EV8 351 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 SLC25A23Q9BV35 468 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 SCML1Q9UN30 329 aa19.69■□□□□ 0.74
SMG8-203ENST00000578922 WDR47O94967 919 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 OTCP00480 354 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 EPB42P16452 691 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 MSX2P35548 267 aaPredicted RBP19.68■□□□□ 0.74
SMG8-203ENST00000578922 FASTKQ14296 549 aaKnown RBP19.68■□□□□ 0.74
SMG8-203ENST00000578922 LARP4Q71RC2 724 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMG8-203ENST00000578922 DEFB123Q8N688 67 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 RNF148Q8N7C7 305 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 OR2L2Q8NH16 312 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 TUBGCP3Q96CW5 907 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 FOPNLQ96NB1 174 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 FZD4Q9ULV1 537 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 FFAR3O14843 346 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 GPR42O15529 346 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 CHEK2O96017 543 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 CATP04040 527 aaKnown RBP19.68■□□□□ 0.74
SMG8-203ENST00000578922 TFAP2AP05549 437 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 SNRPB2P08579 225 aaKnown RBP19.68■□□□□ 0.74
SMG8-203ENST00000578922 FAM58BPP0C7Q3 252 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 TRIM23P36406 574 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 HTR6P50406 440 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 CDKL1Q00532 357 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 RHDQ02161 417 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 GRB7Q14451 532 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 ZNF852Q6ZMS4 543 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 LRRTM4Q86VH4 590 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 ALDH16A1Q8IZ83 802 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 PREBQ9HCU5 417 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 SPAG4Q9NPE6 437 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 PRDM6Q9NQX0 595 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 PHPT1Q9NRX4 125 aaPredicted RBP19.68■□□□□ 0.74
SMG8-203ENST00000578922 C2orf42Q9NWW7 574 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 POLG2Q9UHN1 485 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 MOSPD1Q9UJG1 213 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 CA5BQ9Y2D0 317 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 AP4S1Q9Y587 144 aa19.68■□□□□ 0.74
SMG8-203ENST00000578922 MGAT4DA6NG13 374 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 SCAMP1O15126 338 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 ACADVLP49748 655 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 AP1S2P56377 157 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 CLDN2P57739 230 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 REP15Q6BDI9 236 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 USP30Q70CQ3 517 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 AMZ2Q86W34 360 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 HM13Q8TCT9 377 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 LINC00615Q96LM1 132 aaPredicted RBP19.67■□□□□ 0.74
SMG8-203ENST00000578922 SLC32A1Q9H598 525 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 PTTG2Q9NZH5 202 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 SLC22A14Q9Y267 594 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 RNF11Q9Y3C5 154 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 COL6A3P12111 3177 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 ANKRD33BA6NCL7 494 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 LOC730098B7Z3J9 87 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 FUCA1P04066 466 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 HNMTP50135 292 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 AGKQ53H12 422 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 RASGRP3Q8IV61 690 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 LMNTD1Q8N9Z9 388 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 MSANTD3Q96H12 275 aa19.67■□□□□ 0.74
SMG8-203ENST00000578922 E7ENX8 843 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 LATO43561 262 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 PGM3O95394 542 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 EPORP19235 508 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 GGT5P36269 586 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 CDKL4Q5MAI5 379 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 SAMD4BQ5PRF9 694 aaKnown RBP19.66■□□□□ 0.74
SMG8-203ENST00000578922 NEK5Q6P3R8 708 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 IL27RAQ6UWB1 636 aa19.66■□□□□ 0.74
SMG8-203ENST00000578922 CHST15Q7LFX5 561 aaPredicted RBP19.66■□□□□ 0.74
SMG8-203ENST00000578922 TCAIMQ8N3R3 496 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms