RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ZNF358Q9NW07 568 aa14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 SPHK1Q9NYA1 384 aa14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 EURLQ9NYK6 297 aa14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 AKAP7Q9P0M2 348 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 STOX2Q9P2F5 926 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 LGALS13Q9UHV8 139 aa14.04□□□□□ -0.16
NPLOC4-218ENST00000574964 IGHV5-10-1A0A0J9YXX1 117 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 CCDC189A1A4V9 331 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 FOXO6A8MYZ6 492 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 AGRPO00253 132 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MAP3K7O43318 606 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 KERAO60938 352 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 C9P02748 559 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MYZAPP0CAP1 466 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 UGT2B7P16662 529 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 IMPA1P29218 277 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 PRDX3P30048 256 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 CCT5P48643 541 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 SEPHS1P49903 392 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 PPP1CAP62136 330 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 CDKL1Q00532 357 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 NAE1Q13564 534 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 TRA2AQ13595 282 aaKnown RBP eCLIP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 FASTKQ14296 549 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 TGFBIQ15582 683 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 ISXQ2M1V0 245 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 SPESP1Q6UW49 350 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 SUSD1Q6UWL2 747 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 ZNF574Q6ZN55 896 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 HDXQ7Z353 690 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 TMPRSS9Q7Z410 1059 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 RAB44Q7Z6P3 723 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 B3GNT8Q7Z7M8 397 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 LCA5Q86VQ0 697 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 TCAIMQ8N3R3 496 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 LINC01555Q8NAE3 123 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 RHEBL1Q8TAI7 183 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 HMGCLL1Q8TB92 370 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 FBXL8Q96CD0 374 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MED8Q96G25 268 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 CCDC74BQ96LY2 380 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MAP3K3Q99759 626 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MENTQ9BUN1 341 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 CCDC177Q9NQR7 707 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 WWOXQ9NZC7 414 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 NUDT4Q9NZJ9 180 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 DCDC2Q9UHG0 476 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 POMT2Q9UKY4 750 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 PCDHB11Q9Y5F2 797 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 MN1Q10571 1320 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 SPTBP11277 2137 aa14.03□□□□□ -0.16
NPLOC4-218ENST00000574964 DMXL1Q9Y485 3027 aa14.02□□□□□ -0.16
NPLOC4-218ENST00000574964 FAM149AA5PLN7 773 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 TLCD2A6NGC4 264 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 E7ENX8 843 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 COPEO14579 308 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 KIF1CO43896 1103 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 GLRA3O75311 464 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CCNDBP1O95273 360 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 GSTA1P08263 222 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 THRAP10827 490 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 ERGP11308 486 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 GFAPP14136 432 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 KRT4P19013 534 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CCND1P24385 295 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CCKBRP32239 447 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CSTF2P33240 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 HNMTP50135 292 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 TAP2Q03519 686 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 TARDBPQ13148 414 aaKnown RBP eCLIP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 PPP1R3AQ16821 1122 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 SULT1C3Q6IMI6 304 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CAPN13Q6MZZ7 669 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 TMPRSS7Q7RTY8 843 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CLEC14AQ86T13 490 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 TRABD2AQ86V40 505 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 SLITRK4Q8IW52 837 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 SRRM1Q8IYB3 904 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 C4orf33Q8N1A6 199 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CACTIN-AS1Q8N1I8 211 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 RCBTB1Q8NDN9 531 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 OR2A14Q96R47 310 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 SMC6Q96SB8 1091 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 ATOH8Q96SQ7 321 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 MRPL57Q9BQC6 102 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 ACAT2Q9BWD1 397 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 IQCGQ9H095 443 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 C1GALT1Q9NS00 363 aa14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 INTS7Q9NVH2 962 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CPSF2Q9P2I0 782 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-218ENST00000574964 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 A0A0J9YY10 115 aa14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 UBXN8O00124 270 aa14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 TOX3O15405 576 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 HYAL3O43820 417 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 SMIM24O75264 130 aa14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 TOP3BO95985 862 aaKnown RBP14.01□□□□□ -0.17
NPLOC4-218ENST00000574964 CMPK1P30085 196 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms