RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 NCF1CA8MVU1 366 aaPredicted RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 TK2O00142 265 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 CAPN5O15484 640 aaPredicted RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 IPO13O94829 963 aaKnown RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 C9P02748 559 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 NCF1P14598 390 aaPredicted RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 KCNC1P48547 511 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 IRGCQ6NXR0 463 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 TMEM71Q6P5X7 295 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 RBM44Q6ZP01 1051 aaKnown RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 SLCO6A1Q86UG4 719 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 RHBDF1Q96CC6 855 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 NUDT22Q9BRQ3 303 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 CNOT10Q9H9A5 744 aaKnown RBP16.52■□□□□ 0.24
NUP88-210ENST00000574867 ACTR10Q9NZ32 417 aa16.52■□□□□ 0.24
NUP88-210ENST00000574867 COL27A1Q8IZC6 1860 aaPredicted RBP16.52■□□□□ 0.23
NUP88-210ENST00000574867 UBXN8O00124 270 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 DYNC1I1O14576 645 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 SASH3O75995 380 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 FKBP9O95302 570 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 MTHFD2P13995 350 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 TBPL1P62380 186 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 INSM1Q01101 510 aaPredicted RBP16.52■□□□□ 0.23
NUP88-210ENST00000574867 AGBL2Q5U5Z8 902 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 USP53Q70EK8 1073 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 EXOC3L1Q86VI1 746 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 LRRC56Q8IYG6 542 aaPredicted RBP16.52■□□□□ 0.23
NUP88-210ENST00000574867 CARFQ8N187 725 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 OR56A3Q8NH54 315 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 PCBD2Q9H0N5 130 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 ZNF446Q9NWS9 450 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 WWOXQ9NZC7 414 aa16.52■□□□□ 0.23
NUP88-210ENST00000574867 ATXN7L1Q9ULK2 861 aaPredicted RBP16.52■□□□□ 0.23
NUP88-210ENST00000574867 DCDC2BA2VCK2 349 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 ISM1B1AKI9 464 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 KLK8O60259 260 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 SMIM24O75264 130 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 GFAPP14136 432 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 TAC1P20366 129 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 OAS2P29728 719 aaKnown RBP16.51■□□□□ 0.23
NUP88-210ENST00000574867 RPA3P35244 121 aaPredicted RBP16.51■□□□□ 0.23
NUP88-210ENST00000574867 CFHR1Q03591 330 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 FASTKQ14296 549 aaKnown RBP16.51■□□□□ 0.23
NUP88-210ENST00000574867 CAPN13Q6MZZ7 669 aaPredicted RBP16.51■□□□□ 0.23
NUP88-210ENST00000574867 SPESP1Q6UW49 350 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 CDHR3Q6ZTQ4 885 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 TAX1BP1Q86VP1 789 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 FBXO39Q8N4B4 442 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 PPFIBP2Q8ND30 876 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 UBTD2Q8WUN7 234 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 ZBTB9Q96C00 473 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 MED8Q96G25 268 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 TGM7Q96PF1 710 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 SPHK1Q9NYA1 384 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 CPSF2Q9P2I0 782 aaKnown RBP16.51■□□□□ 0.23
NUP88-210ENST00000574867 MID2Q9UJV3 735 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 PCDHB11Q9Y5F2 797 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 UNC13CQ8NB66 2214 aa16.51■□□□□ 0.23
NUP88-210ENST00000574867 A0A1W2PPV9 198 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TLCD2A6NGC4 264 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TOX3O15405 576 aaPredicted RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 UGT2B7P16662 529 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PEBP1P30086 187 aaKnown RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 GGT5P36269 586 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 ALDH18A1P54886 795 aaKnown RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 GFERP55789 205 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 NAE1Q13564 534 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 SLC5A12Q1EHB4 618 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 CDCP2Q5VXM1 449 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 C2orf73Q8N5S3 287 aaPredicted RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 RDH11Q8TC12 318 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TLCD1Q96CP7 247 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 OR2A14Q96R47 310 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 SGPP1Q9BX95 441 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 ATG10Q9H0Y0 220 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PDP2Q9P2J9 529 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PTBP2Q9UKA9 531 aaKnown RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 EMCNQ9ULC0 261 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TARM1B6A8C7 271 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 CASC3O15234 703 aaKnown RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 PRICKLE3O43900 615 aaPredicted RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 TYROBPO43914 113 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PLIN3O60664 434 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 CCNDBP1O95273 360 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PROCP04070 461 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 THRAP10827 490 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PRDX3P30048 256 aaKnown RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 PPP1CAP62136 330 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TSTA3Q13630 321 aaPredicted RBP16.5■□□□□ 0.23
NUP88-210ENST00000574867 PTCHD3Q3KNS1 767 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PRAMEF13Q5VWM6 474 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 C16orf46Q6P387 395 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 SUSD1Q6UWL2 747 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 PRSS42Q7Z5A4 293 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 SLITRK4Q8IW52 837 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 KLHDC8AQ8IYD2 350 aa16.5■□□□□ 0.23
NUP88-210ENST00000574867 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms