RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PRMT5O14744 637 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 KATNA1O75449 491 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 KRT14P02533 472 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 NTRK1P04629 796 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SFTPCP11686 197 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 IMPDH2P12268 514 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 ITGB6P18564 788 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TCN2P20062 427 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TPSB2P20231 275 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 F8A1P23610 371 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 MGAT1P26572 445 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 NMBRP28336 390 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 CCR7P32248 378 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 DLSTP36957 453 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 COILP38432 576 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 TTPAP49638 278 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 CSE1LP55060 971 aaKnown RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 TUBB4BP68371 445 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 CRADDP78560 199 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 MC1RQ01726 317 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 HSPA14Q0VDF9 509 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 GPS1Q13098 491 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TUBB2AQ13885 445 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SEMA3AQ14563 771 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TPSAB1Q15661 275 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 KCTD19Q17RG1 926 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 SYTL3Q4VX76 610 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 AARS2Q5JTZ9 985 aaKnown RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 PWWP2BQ6NUJ5 590 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 BORAQ6PGQ7 559 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SDCCAG8Q86SQ7 713 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 LDB1Q86U70 411 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 ADGRF3Q8IZF5 1079 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 OR5AR1Q8NGP9 310 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 OR8K5Q8NH50 307 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 ASZ1Q8WWH4 475 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 WFDC12Q8WWY7 111 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 ZNF501Q96CX3 271 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 PPM1MQ96MI6 270 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 NAP1L3Q99457 506 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 NRTNQ99748 197 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TUBB2BQ9BVA1 445 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 KIFC1Q9BW19 673 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 AP1M1Q9BXS5 423 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 XKR8Q9H6D3 395 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SYTL2Q9HCH5 934 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TREX1Q9NSU2 369 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SOHLH2Q9NX45 425 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 KCND3Q9UK17 655 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 POMT2Q9UKY4 750 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TTC7AQ9ULT0 858 aaPredicted RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 BTRCQ9Y297 605 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 TDRKHQ9Y2W6 561 aaKnown RBP7.2□□□□□ -1.26
NUP88-205ENST00000572809 ATRXP46100 2492 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 MGAQ8IWI9 3026 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 PIPSLA2A3N6 862 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 IQCF5A8MTL0 148 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 B8ZZF3 427 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 BTN3A1O00481 513 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 KPNA5O15131 536 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 KIF5CO60282 957 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 KDM1AO60341 852 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 AVILO75366 819 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 GPC4O75487 556 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 NDUFS3O75489 264 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 SCRG1O75711 98 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 VAPBO95292 243 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 TIAF1O95411 115 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 APOA4P06727 396 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 FAM87AP0C7U9 286 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 TPBGLP0DKB5 382 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 PRKAR1AP10644 381 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 ST6GAL1P15907 406 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 SSTR4P31391 388 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 SHMT2P34897 504 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 CCR10P46092 362 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 VPS41P49754 854 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 ABRQ12979 859 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 KCNJ11Q14654 390 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 GPR19Q15760 415 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 FBXW10Q5XX13 1052 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 PTRHD1Q6GMV3 140 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 TTC27Q6P3X3 843 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 FAM199XQ6PEV8 388 aaPredicted RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 CCDC137Q6PK04 289 aaKnown RBP7.19□□□□□ -1.26
NUP88-205ENST00000572809 CES3Q6UWW8 571 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 UNC5AQ6ZN44 842 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 REC114Q7Z4M0 266 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 HOOK3Q86VS8 718 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 TMEM126BQ8IUX1 230 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 KRT222Q8N1A0 295 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 SLC35F6Q8N357 371 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 OR5K2Q8NHB8 316 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 CFAP61Q8NHU2 1237 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 FBXO27Q8NI29 283 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 STARD8Q92502 1023 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 MFSD3Q96ES6 412 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 TRAPPC9Q96Q05 1148 aa7.19□□□□□ -1.26
NUP88-205ENST00000572809 PANX3Q96QZ0 392 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms