RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 DCAF12Q5T6F0 453 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 PTRHD1Q6GMV3 140 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 TMEM207Q6UWW9 146 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CEACAM20Q6UY09 585 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 PIWIL4Q7Z3Z4 852 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ARHGEF39Q8N4T4 335 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ZBTB2Q8N680 514 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 C19orf47Q8N9M1 422 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 NOA1Q8NC60 698 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 OR2L8Q8NGY9 312 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 OR1L3Q8NH93 324 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FBXO25Q8TCJ0 367 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 LRRC39Q96DD0 335 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ZNF285Q96NJ3 590 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 PANX3Q96QZ0 392 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 NDNQ99608 321 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 GPR21Q99679 349 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FAM167BQ9BTA0 163 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ASPSCR1Q9BZE9 553 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 TRIM31Q9BZY9 425 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SEMA4CQ9C0C4 833 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SRMSQ9H3Y6 488 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FGF21Q9NSA1 209 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 IARS2Q9NSE4 1012 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 OR6C2Q9NZP2 312 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SAMD15Q9P1V8 674 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 WHRNQ9P202 907 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 IL17BQ9UHF5 180 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 MAD1L1Q9Y6D9 718 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 BAHCC1Q9P281 2608 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 SPTA1P02549 2419 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 ESYT3A0FGR9 886 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 CXorf49A8MYA2 514 aaPredicted RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 C2orf74A8MZ97 194 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 H3BMM5 538 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 GFYI3L273 518 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 POLR1CO15160 346 aaPredicted RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 SPAG6O75602 509 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 RASSF9O75901 435 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 PIAS1O75925 651 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 MED26O95402 600 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 TTC4O95801 387 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 APOA4P06727 396 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 PAMP19021 973 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 MAGP20916 626 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 CASQ1P31415 396 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 SKIV2L2P42285 1042 aaKnown RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 UCNP55089 124 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 TUBB4BP68371 445 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 CXADRP78310 365 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 HSD11B2P80365 405 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 GPS2Q13227 327 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 TUBB2AQ13885 445 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 IL11RAQ14626 422 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 PPP1R3AQ16821 1122 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 KLHL38Q2WGJ6 581 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 DEFB110Q30KQ9 67 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 LINC00303Q3SY05 128 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 FCRL6Q6DN72 434 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 KLHL35Q6PF15 583 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 FAM198BQ6UWH4 519 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 KIAA0408Q6ZU52 694 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 OTOAQ7RTW8 1153 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 CPNE9Q8IYJ1 553 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 DNAJC22Q8N4W6 341 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 LRRN4CLQ8ND94 238 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 FBXO36Q8NEA4 188 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 OR2A1Q8NGT9 310 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 ASB11Q8WXH4 323 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 ZPBPQ9BS86 351 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 NAT9Q9BTE0 207 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 TUBB2BQ9BVA1 445 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 POLG2Q9UHN1 485 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 ADAMTS6Q9UKP5 1117 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 SH2B3Q9UQQ2 575 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 DHRS7Q9Y394 339 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 MRPS18BQ9Y676 258 aaKnown RBP8.37□□□□□ -1.07
SMG6-210ENST00000572205 DOCK10Q96BY6 2186 aa8.37□□□□□ -1.07
SMG6-210ENST00000572205 CPAMD8Q8IZJ3 1885 aa8.36□□□□□ -1.07
SMG6-210ENST00000572205 A0A0J9YY10 115 aa8.36□□□□□ -1.07
SMG6-210ENST00000572205 PIPSLA2A3N6 862 aa8.36□□□□□ -1.07
SMG6-210ENST00000572205 GSAPA4D1B5 854 aa8.36□□□□□ -1.07
SMG6-210ENST00000572205 EIF3FO00303 357 aaPredicted RBP8.36□□□□□ -1.07
SMG6-210ENST00000572205 ATXN7O15265 892 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms