RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MERTKQ12866 999 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PDZK1IP1Q13113 114 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 OLIG2Q13516 323 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 BOP1Q14137 746 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 E2F2Q14209 437 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GPNMBQ14956 572 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NOMO1Q15155 1222 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SIX1Q15475 284 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 TSC22D1Q15714 1073 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SOWAHAQ2M3V2 549 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GOLGA7BQ2TAP0 167 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 HNRNPA1L2Q32P51 320 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 FAM153CQ494X1 144 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 LINC01559Q495D7 138 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PLA1AQ53H76 456 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 XKR4Q5GH76 650 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 DCST1Q5T197 706 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 UBAP2Q5T6F2 1119 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 C18orf63Q68DL7 685 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NAPEPLDQ6IQ20 393 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PLEKHA7Q6IQ23 1121 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PTCRAQ6ISU1 281 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 C11orf63Q6NUN7 778 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SCYL2Q6P3W7 929 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 FAM171BQ6P995 826 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CRTC3Q6UUV7 619 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CD300LGQ6UXG3 332 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CLEC9AQ6UXN8 241 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 FAM183BPQ6ZVS7 135 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 LIMS2Q7Z4I7 341 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PRUNE1Q86TP1 453 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CXorf67Q86X51 503 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZNF677Q86XU0 584 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 XYLT1Q86Y38 959 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MIB1Q86YT6 1006 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CCDC103Q8IW40 242 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 FOXRED2Q8IWF2 684 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SCUBE3Q8IX30 993 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 IFT20Q8IY31 132 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 HACE1Q8IYU2 909 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ARHGEF39Q8N4T4 335 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MREGQ8N565 214 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MEIOBQ8N635 442 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ARFGAP1Q8N6T3 406 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 EMC1Q8N766 993 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CCNYL1Q8N7R7 359 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ASCC1Q8N9N2 400 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 MINDY2Q8NBR6 621 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CAMKVQ8NCB2 501 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 RNF169Q8NCN4 708 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 C11orf65Q8NCR3 313 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GPR156Q8NFN8 814 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 TTLQ8NG68 377 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 OR5T1Q8NG75 326 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 OR7G3Q8NG95 312 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 OR6B3Q8NGW1 331 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 RAB3IL1Q8TBN0 382 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MAGEC3Q8TD91 643 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CLEC4CQ8WTT0 213 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 OSCP1Q8WVF1 389 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CAPSLQ8WWF8 208 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NRG4Q8WWG1 115 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CASKIN2Q8WXE0 1202 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 RLN3Q8WXF3 142 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NDRG1Q92597 394 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 CAVIN3Q969G5 261 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 FBXW5Q969U6 566 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CIDECQ96AQ7 238 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 RAD51AP1Q96B01 352 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GRAMD1AQ96CP6 724 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SLC25A36Q96CQ1 311 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 TMCO6Q96DC7 493 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SAT2Q96F10 170 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 TMEM176AQ96HP8 235 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 C12orf66Q96MD2 445 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MCEEQ96PE7 176 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 HTATIP2Q9BUP3 242 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 BDH2Q9BUT1 245 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZNF416Q9BWM5 594 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SPATA16Q9BXB7 569 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZNF350Q9GZX5 532 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NEUROG2Q9H2A3 272 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 LRMDAQ9H2I8 198 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SP110Q9HB58 689 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 C12orf4Q9NQ89 552 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 BATF3Q9NR55 127 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 TLR8Q9NR97 1041 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 TMPRSS4Q9NRS4 437 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZDHHC18Q9NUE0 388 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PNPOQ9NVS9 261 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NKIRAS1Q9NYS0 192 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MPP6Q9NZW5 540 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ADAM22Q9P0K1 906 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SH3BP4Q9P0V3 963 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 KLHL8Q9P2G9 620 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 CTSFQ9UBX1 484 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 DNAJB4Q9UDY4 337 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CGGBP1Q9UFW8 167 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 SLCO3A1Q9UIG8 710 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms