RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 P4HTMQ9NXG6 502 aa13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 GPR83Q9NYM4 423 aa13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 DRG1Q9Y295 367 aaKnown RBP13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 ZKSCAN5Q9Y2L8 839 aa13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 ZNF451Q9Y4E5 1061 aa13.29□□□□□ -0.28
GTF3C1-211ENST00000569653 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 MAP3K7O43318 606 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 SEMA7AO75326 666 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 AVILO75366 819 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 C1orf105O95561 183 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 GAS8O95995 478 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 FGGP02679 453 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 APOA4P06727 396 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 RPS3P23396 243 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■■□□ 17.4
GTF3C1-211ENST00000569653 CXCR5P32302 372 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 BASP1P80723 227 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 MRPL49Q13405 166 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 FASTKQ14296 549 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 SSPNQ14714 243 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 PLEKHN1Q494U1 663 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 ANKRD22Q5VYY1 191 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 TTC27Q6P3X3 843 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 FIGLAQ6QHK4 219 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 HOOK3Q86VS8 718 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 ATCAYQ86WG3 371 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 RAB43Q86YS6 212 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 AGGF1Q8N302 714 aaeCLIP13.28□□□□□ -0.286e-10■□□□□ 9
GTF3C1-211ENST00000569653 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 FAM136AQ96C01 138 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 ZNF552Q9H707 407 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 ENAMQ9NRM1 1142 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 IL1RAPL1Q9NZN1 696 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 IFT80Q9P2H3 777 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 TTC7AQ9ULT0 858 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 SRPK3Q9UPE1 567 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 PADI2Q9Y2J8 665 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 CSAG2Q9Y5P2 127 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 POLEQ07864 2286 aa13.28□□□□□ -0.28
GTF3C1-211ENST00000569653 SVILO95425 2214 aa13.27□□□□□ -0.28
GTF3C1-211ENST00000569653 NOTCH2Q04721 2471 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TCP11X1B4DZS4 312 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 VAPBO95292 243 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 ONECUT2O95948 504 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 S1PR4O95977 384 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 FOLR3P41439 243 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TTPAP49638 278 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TERF1P54274 439 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 EIF3BP55884 814 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 SNRPNP63162 240 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 KCNJ11Q14654 390 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TRIP13Q15645 432 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TYSND1Q2T9J0 566 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 CRB2Q5IJ48 1285 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 PTRHD1Q6GMV3 140 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 FRMPD2BQ6IN97 320 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 CNSTQ6PJW8 725 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 TTLL10Q6ZVT0 673 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 OR2A1Q8NGT9 310 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 SPSB2Q99619 263 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 IL22Q9GZX6 179 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 CTSFQ9UBX1 484 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 MED16Q9Y2X0 877 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 JRKLQ9Y4A0 524 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 PCDHGB7Q9Y5F8 929 aa13.27□□□□□ -0.29
GTF3C1-211ENST00000569653 LOC105369274A0A096LPK9 316 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 LOC102723532A0A0G2JNH3 316 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 SOCS6O14544 535 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 CEP104O60308 925 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 DPM1O60762 260 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 GP1BBP13224 206 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 TPSB2P20231 275 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 OR1D4P47884 311 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 RRADP55042 308 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 MYBPC3Q14896 1274 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 NKG7Q16617 165 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 VWA5B1Q5TIE3 1220 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 LRRC8BQ6P9F7 803 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 SHISA6Q6ZSJ9 500 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 CENPUQ71F23 418 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 CAND1Q86VP6 1230 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 OR4N4Q8N0Y3 316 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 GALNT16Q8N428 558 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 OR2L3Q8NG85 312 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 HMGCLL1Q8TB92 370 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 PNPLA2Q96AD5 504 aa13.26□□□□□ -0.29
GTF3C1-211ENST00000569653 TTC1Q99614 292 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms