RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CYP4F2P78329 520 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 MPP1Q00013 466 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 GPS2Q13227 327 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 CTBP1Q13363 440 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 RNF187Q5TA31 235 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 AGBL2Q5U5Z8 902 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 STRA8Q7Z7C7 330 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 BPHLQ86WA6 291 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 CARFQ8N187 725 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 GOLGA6L1Q8N7Z2 621 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 GALNT6Q8NCL4 622 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 LSM14AQ8ND56 463 aaKnown RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 LKAAEAR1Q8TD35 194 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SKA2Q8WVK7 121 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 MRRFQ96E11 262 aaKnown RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 PPM1MQ96MI6 270 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 PANX3Q96QZ0 392 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 RBBP8Q99708 897 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 ARHGAP9Q9BRR9 750 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 EFHD1Q9BUP0 239 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SPRY4Q9C004 299 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 RHOJQ9H4E5 214 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 MED4Q9NPJ6 270 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 C1GALT1Q9NS00 363 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 FGF21Q9NSA1 209 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 INTS10Q9NVR2 710 aaKnown RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 POMT2Q9UKY4 750 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 LOC101059948A0A1B0GTJ6 334 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 TK2O00142 265 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 KPNA5O15131 536 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 FAM155BO75949 473 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 DLGAP3O95886 979 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 RPN2P04844 631 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 AOAHP28039 575 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 ATP5DP30049 168 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 SPRP35270 261 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-225ENST00000569245 ABHD18Q0P651 414 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 GPR19Q15760 415 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 OTOAQ7RTW8 1153 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 ZC3HC1Q86WB0 502 aaKnown RBP14.01□□□□□ -0.17
COMMD4-225ENST00000569245 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 SLC22A15Q8IZD6 547 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 CYP4X1Q8N118 509 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 D2HGDHQ8N465 521 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 OR5K2Q8NHB8 316 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 MZB1Q8WU39 189 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 MTBPQ96DY7 904 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 KLHL25Q9H0H3 589 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 STMN4Q9H169 189 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-225ENST00000569245 P2RY12Q9H244 342 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 FANCEQ9HB96 536 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 ACTR10Q9NZ32 417 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 PLAGL1Q9UM63 463 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 ICKQ9UPZ9 632 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 SMG1Q96Q15 3661 aaKnown RBP14.01□□□□□ -0.17
COMMD4-225ENST00000569245 KALRNO60229 2985 aa14.01□□□□□ -0.17
COMMD4-225ENST00000569245 PIPSLA2A3N6 862 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 HMX2A2RU54 273 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 HAUS5O94927 633 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 MT-ND3P03897 115 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 PRB1P04280 392 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 NTRK1P04629 796 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 SNRPAP09012 282 aaKnown RBP14□□□□□ -0.17
COMMD4-225ENST00000569245 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.179e-8■■■■□ 25.4
COMMD4-225ENST00000569245 ADARP55265 1226 aaKnown RBP14□□□□□ -0.17
COMMD4-225ENST00000569245 MAP7Q14244 749 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 HSP90B2PQ58FF3 399 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 PWWP2BQ6NUJ5 590 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TTC23LQ6PF05 361 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TIFABQ6ZNK6 161 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TMEM126BQ8IUX1 230 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 ADGRF3Q8IZF5 1079 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TTC9Q92623 222 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 EXTL1Q92935 676 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 ARL8AQ96BM9 186 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 FAM136AQ96C01 138 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TLCD1Q96CP7 247 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 WBP1Q96G27 269 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 VPS39Q96JC1 886 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 FBXO6Q9NRD1 293 aaPredicted RBP14□□□□□ -0.17
COMMD4-225ENST00000569245 OR6C2Q9NZP2 312 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 TBK1Q9UHD2 729 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 PADI1Q9ULC6 663 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 CORO1CQ9ULV4 474 aaPredicted RBP14□□□□□ -0.17
COMMD4-225ENST00000569245 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
COMMD4-225ENST00000569245 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ISM1B1AKI9 464 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 HMGB1P1B2RPK0 211 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-225ENST00000569245 H3BMM5 538 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 KATNA1O75449 491 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 GPC4O75487 556 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 SCRG1O75711 98 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 SLCO2B1O94956 709 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 TIAF1O95411 115 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ESR1P03372 595 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ITGB2P05107 769 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms