RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SMAD5Q99717 465 aaKnown RBP17.59■□□□□ 0.41
USB1-213ENST00000566292 GPR83Q9NYM4 423 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 SOX13Q9UN79 622 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 UTP20O75691 2785 aaKnown RBP17.59■□□□□ 0.41
USB1-213ENST00000566292 HEATR5BQ9P2D3 2071 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 KPNA5O15131 536 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 DPM1O60762 260 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 AVILO75366 819 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 UMODP07911 640 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 MCM3P25205 808 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 PSMB5P28074 263 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 FMO4P31512 558 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 GRIA3P42263 894 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 KCNJ11Q14654 390 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 SF1Q15637 639 aaKnown RBP17.58■□□□□ 0.4
USB1-213ENST00000566292 TYSND1Q2T9J0 566 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 JMJD6Q6NYC1 403 aaPredicted RBP17.58■□□□□ 0.4
USB1-213ENST00000566292 FAM26EQ8N5C1 309 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 OTUD6BQ8N6M0 293 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 Q8NA96 180 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 GSDMBQ8TAX9 411 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 DENND1AQ8TEH3 1009 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 LPGAT1Q92604 370 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 RAD51AP1Q96B01 352 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 IP6K3Q96PC2 410 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 RAB11FIP5Q9BXF6 653 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 MFRPQ9BY79 579 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.4
USB1-213ENST00000566292 MAP4K5Q9Y4K4 846 aa17.58■□□□□ 0.4
USB1-213ENST00000566292 MDC1Q14676 2089 aaKnown RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 SPTAN1Q13813 2472 aaKnown RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 MASP2O00187 686 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 NIPSNAP2O75323 286 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 CD63P08962 238 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 ALAS2P22557 587 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 VPS41P49754 854 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 GBX1Q14549 363 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 PRR30Q53SZ7 412 aaPredicted RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 DCAF10Q5QP82 559 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 ANKRD22Q5VYY1 191 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 SLC6A19Q695T7 634 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 KIAA0930Q6ICG6 404 aaPredicted RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 MRNIPQ6NTE8 343 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TTC23LQ6PF05 361 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 CNSTQ6PJW8 725 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TTLL10Q6ZVT0 673 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 PPP1R32Q7Z5V6 425 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 EFCAB3Q8N7B9 438 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 SKA2Q8WVK7 121 aaPredicted RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 DLG3Q92796 817 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 COL26A1Q96A83 441 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 PTERQ96BW5 349 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 FAM136AQ96C01 138 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 ZNF285Q96NJ3 590 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TRIM56Q9BRZ2 755 aaKnown RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 HOMER3Q9NSC5 361 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 INTS7Q9NVH2 962 aaKnown RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 LUZP4Q9P127 313 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TSR3Q9UJK0 312 aaKnown RBP17.57■□□□□ 0.4
USB1-213ENST00000566292 ESPL1Q14674 2120 aa17.57■□□□□ 0.4
USB1-213ENST00000566292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.56■□□□□ 0.4
USB1-213ENST00000566292 A0A1B0GX78 115 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 A0A1W2PPV9 198 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 NRP2O60462 931 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 CTSVO60911 334 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 FKBP9O95302 570 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 ONECUT2O95948 504 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 GNLYP22749 145 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 MAGEA6P43360 314 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 ARSFP54793 590 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 GPS1Q13098 491 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 ZC3H12BQ5HYM0 836 aaKnown RBP17.56■□□□□ 0.4
USB1-213ENST00000566292 COX15Q7KZN9 410 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 SDCCAG8Q86SQ7 713 aaPredicted RBP17.56■□□□□ 0.4
USB1-213ENST00000566292 CAND1Q86VP6 1230 aaKnown RBP17.56■□□□□ 0.4
USB1-213ENST00000566292 HPS6Q86YV9 775 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 GALNT11Q8NCW6 608 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 HMGCLL1Q8TB92 370 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.56■□□□□ 0.4
USB1-213ENST00000566292 ZUFSPQ96AP4 578 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 FER1L6-AS2Q96M78 137 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 MIPEPQ99797 713 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 ENAMQ9NRM1 1142 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 CUTCQ9NTM9 273 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 P4HTMQ9NXG6 502 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 GALPQ9UBC7 116 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 CRYL1Q9Y2S2 319 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 KLK4Q9Y5K2 254 aa17.56■□□□□ 0.4
USB1-213ENST00000566292 TARM1B6A8C7 271 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 PEX12O00623 359 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 DSCR3O14972 297 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 VPS4BO75351 444 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 MATN4O95460 622 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 OGNP20774 298 aaKnown RBP17.55■□□□□ 0.4
USB1-213ENST00000566292 CCNFP41002 786 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 ADARP55265 1226 aaKnown RBP17.55■□□□□ 0.4
USB1-213ENST00000566292 YBX1P67809 324 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms