RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SPARCP09486 303 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PGAM1P18669 254 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CTHP32929 405 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SSTP61278 116 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ERVK-8P63133 956 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DEFA5Q01523 94 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMEM132BQ14DG7 1078 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZSWIM7Q19AV6 140 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SH3PXD2AQ5TCZ1 1133 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TFAP2EQ6VUC0 442 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RRM2BQ7LG56 351 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SAMD11Q96NU1 681 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NODALQ96S42 347 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SECISBP2Q96T21 854 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 RBBP8Q99708 897 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 HEXA-AS1Q9H8Q6 139 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SCN3BQ9NY72 215 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 VNN3Q9NY84 501 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NYAP2Q9P242 653 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 REV1Q9UBZ9 1251 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF222Q9UK12 451 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NPIPA1Q9UND3 350 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ATP6AP2A0A1C7CYW4 349 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC35F4A4IF30 521 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NCAM2O15394 837 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TGM6O95932 706 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 IGFBP1P08833 259 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 IL7P13232 177 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PFKLP17858 780 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FMO4P31512 558 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 HOXC5Q00444 222 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CDH17Q12864 832 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZMYND11Q15326 602 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF704Q6ZNC4 412 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 LIMS2Q7Z4I7 341 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DPPA2Q7Z7J5 298 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GALNT10Q86SR1 603 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CEP97Q8IW35 865 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PLD6Q8N2A8 252 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 RAET1EQ8TD07 263 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 HEXIM2Q96MH2 286 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 RAD9AQ99638 391 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC6A7Q99884 636 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LRRC4Q9HBW1 653 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FZD1Q9UP38 647 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DTX4Q9Y2E6 619 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PCDHA11Q9Y5I1 949 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 KCNE2Q9Y6J6 123 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OAS3Q9Y6K5 1087 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 HSPE1-MOB4S4R3N1 261 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DNASE2O00115 360 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PRMT5O14744 637 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PCDH17O14917 1159 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DCLK1O15075 740 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC16A4O15374 487 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ITGA2P17301 1181 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 EMC2Q15006 297 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 UAP1L1Q3KQV9 507 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 Q5PR19 223 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RAP1GAP2Q684P5 730 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SEL1L3Q68CR1 1132 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LIPIQ6XZB0 460 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CDH26Q8IXH8 852 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZBTB44Q8NCP5 570 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMBIM1Q969X1 311 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAF2Q96CS3 445 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PEBP4Q96S96 227 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RNF121Q9H920 327 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ACSS2Q9NR19 701 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.86□□□□□ -1.952e-6■■□□□ 11.7
CHD9-218ENST00000566029 CDYLQ9Y232 598 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CACNG2Q9Y698 323 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CROCCQ5TZA2 2017 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TPP1O14773 563 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 RNGTTO60942 597 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 TRUB2O95900 331 aaKnown RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 IFNA14P01570 189 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 FTH1P02794 183 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 HMGCRP04035 888 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ALPPP05187 535 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 C2P06681 752 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CLTBP09497 229 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 FAM157BP0CG42 384 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 LIPAP38571 399 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CASRP41180 1078 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CTSKP43235 329 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TPMTP51580 245 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 BIKQ13323 160 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 STXBP2Q15833 593 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 FAM160B1Q5W0V3 765 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ZNF680Q8NEM1 530 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 ACVR1CQ8NER5 493 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 TSTD1Q8NFU3 115 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SUN3Q8TAQ9 357 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SKA2Q8WVK7 121 aaPredicted RBP2.85□□□□□ -1.95
CHD9-218ENST00000566029 ZNF516Q92618 1163 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 CCDC120Q96HB5 630 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 MSTO1Q9BUK6 570 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 MAT2BQ9NZL9 334 aa2.85□□□□□ -1.95
CHD9-218ENST00000566029 SAE1Q9UBE0 346 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms