RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 MLF1P58340 268 aa3□□□□□ -1.93
CHD9-216ENST00000565803 UBE2KP61086 200 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MXRA7P84157 204 aa3□□□□□ -1.93
CHD9-216ENST00000565803 EFNB1P98172 346 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SPEM2Q0P670 501 aa3□□□□□ -1.93
CHD9-216ENST00000565803 BST1Q10588 318 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TARDBPQ13148 414 aaKnown RBP eCLIP3□□□□□ -1.93
CHD9-216ENST00000565803 SGCAQ16586 387 aa3□□□□□ -1.93
CHD9-216ENST00000565803 COL28A1Q2UY09 1125 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TBRG1Q3YBR2 411 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MPPE1Q53F39 396 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CDKAL1Q5VV42 579 aa3□□□□□ -1.93
CHD9-216ENST00000565803 GPAT2Q6NUI2 795 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZC3H14Q6PJT7 736 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 KIAA1324Q6UXG2 1013 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 HSDL2Q6YN16 418 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TPGS1Q6ZTW0 290 aa3□□□□□ -1.93
CHD9-216ENST00000565803 USP30Q70CQ3 517 aa3□□□□□ -1.93
CHD9-216ENST00000565803 GLB1L2Q8IW92 636 aa3□□□□□ -1.93
CHD9-216ENST00000565803 STKLD1Q8NE28 680 aa3□□□□□ -1.93
CHD9-216ENST00000565803 OR4A16Q8NH70 328 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF473Q8WTR7 871 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 FAR1Q8WVX9 515 aa3□□□□□ -1.93
CHD9-216ENST00000565803 FRAT1Q92837 279 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 MIB2Q96AX9 1013 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CDKN2AIPNLQ96HQ2 116 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MEGF10Q96KG7 1140 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ALKBH7Q9BT30 221 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 SLC25A23Q9BV35 468 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TSSK1BQ9BXA7 367 aa3□□□□□ -1.93
CHD9-216ENST00000565803 POLR1EQ9GZS1 481 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 SLC6A15Q9H2J7 730 aa3□□□□□ -1.93
CHD9-216ENST00000565803 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 CAB39LQ9H9S4 337 aa3□□□□□ -1.93
CHD9-216ENST00000565803 UCK1Q9HA47 277 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TLR9Q9NR96 1032 aa3□□□□□ -1.93
CHD9-216ENST00000565803 HIF1ANQ9NWT6 349 aa3□□□□□ -1.93
CHD9-216ENST00000565803 BARHL2Q9NY43 387 aa3□□□□□ -1.93
CHD9-216ENST00000565803 OR6C3Q9NZP0 311 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CRNNQ9UBG3 495 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 USP22Q9UPT9 525 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ADAM18Q9Y3Q7 739 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PCDHB6Q9Y5E3 794 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SNX14Q9Y5W7 946 aa3□□□□□ -1.93
CHD9-216ENST00000565803 NFS1Q9Y697 457 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CACNA1FO60840 1977 aa3□□□□□ -1.93
CHD9-216ENST00000565803 A0A087WUV0 522 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 A0A0A6YYH2 397 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MED19A0JLT2 244 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 A6NJ64 397 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ANXA2P2A6NMY6 339 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ANKRD30BLA7E2S9 258 aa3□□□□□ -1.93
CHD9-216ENST00000565803 AHRRA9YTQ3 701 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TOR1AO14656 332 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MAP2K7O14733 419 aa3□□□□□ -1.93
CHD9-216ENST00000565803 GPR32O75388 356 aa3□□□□□ -1.93
CHD9-216ENST00000565803 GALTP07902 379 aa3□□□□□ -1.93
CHD9-216ENST00000565803 C8orf89P0DMQ9 161 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MYL6BP14649 208 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PCMT1P22061 227 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PRDX5P30044 214 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MC3RP41968 323 aa3□□□□□ -1.93
CHD9-216ENST00000565803 IST1P53990 364 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SP2Q02086 613 aa3□□□□□ -1.93
CHD9-216ENST00000565803 KLC1Q07866 573 aa3□□□□□ -1.93
CHD9-216ENST00000565803 LSAMPQ13449 338 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SCARF1Q14162 830 aa3□□□□□ -1.93
CHD9-216ENST00000565803 DNAL1Q4LDG9 190 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZCWPW2Q504Y3 356 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CDKL4Q5MAI5 379 aa3□□□□□ -1.93
CHD9-216ENST00000565803 LGSNQ5TDP6 509 aa3□□□□□ -1.93
CHD9-216ENST00000565803 VWA5B1Q5TIE3 1220 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF468Q5VIY5 522 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 FAM69BQ5VUD6 431 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZDHHC20Q5W0Z9 365 aa3□□□□□ -1.93
CHD9-216ENST00000565803 BTBD8Q5XKL5 378 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SLC22A10Q63ZE4 541 aa3□□□□□ -1.93
CHD9-216ENST00000565803 STEAP3Q658P3 488 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SLC25A25Q6KCM7 469 aa3□□□□□ -1.93
CHD9-216ENST00000565803 DPY19L2P1Q6NXN4 242 aa3□□□□□ -1.93
CHD9-216ENST00000565803 TTC33Q6PID6 262 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 TMEM108Q6UXF1 575 aa3□□□□□ -1.93
CHD9-216ENST00000565803 DET1Q7L5Y6 550 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PDZD3Q86UT5 571 aa3□□□□□ -1.93
CHD9-216ENST00000565803 FUNDC1Q8IVP5 155 aa3□□□□□ -1.93
CHD9-216ENST00000565803 AQP12AQ8IXF9 295 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF34Q8IZ26 560 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MLKLQ8NB16 471 aa3□□□□□ -1.93
CHD9-216ENST00000565803 OR56B1Q8NGI3 324 aa3□□□□□ -1.93
CHD9-216ENST00000565803 OR2T3Q8NH03 318 aa3□□□□□ -1.93
CHD9-216ENST00000565803 CA5BP1Q8WTZ4 195 aa3□□□□□ -1.93
CHD9-216ENST00000565803 OR1E3Q8WZA6 343 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF707Q96C28 371 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 COQ8BQ96D53 544 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF514Q96K75 400 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 PBKQ96KB5 322 aa3□□□□□ -1.93
CHD9-216ENST00000565803 MRGPRX1Q96LB2 322 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PRRC1Q96M27 445 aa3□□□□□ -1.93
CHD9-216ENST00000565803 C5orf34Q96MH7 638 aa3□□□□□ -1.93
CHD9-216ENST00000565803 BBS4Q96RK4 519 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms