RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ESR1P03372 595 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MCM3P25205 808 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 OTX2P32243 289 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 COILP38432 576 aaPredicted RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 FOLR3P41439 243 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MAGEA3P43357 314 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 ADARP55265 1226 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 YBX1P67809 324 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 SARNPP82979 210 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 DHX34Q14147 1143 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 FASTKQ14296 549 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 SF1Q15637 639 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 NKAIN1Q4KMZ8 207 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 ACSBG2Q5FVE4 666 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF470Q6ECI4 717 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CASC4Q6P4E1 433 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 TTC23LQ6PF05 361 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CCDC137Q6PK04 289 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CENPUQ71F23 418 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MED25Q71SY5 747 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 RAB43Q86YS6 212 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MCATQ8IVS2 390 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 AGGF1Q8N302 714 aaeCLIP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 TMEM102Q8N9M5 508 aaPredicted RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MCUQ8NE86 351 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 FDCSPQ8NFU4 85 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 OR2L3Q8NG85 312 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 COG1Q8WTW3 980 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MIB2Q96AX9 1013 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 RAD51AP1Q96B01 352 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF669Q96BR6 464 aaPredicted RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 TCF12Q99081 682 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MIPEPQ99797 713 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 C17orf62Q9BQA9 187 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 NDC1Q9BTX1 674 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 NUDT9Q9BW91 350 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 MED16Q9Y2X0 877 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 PTRH2Q9Y3E5 179 aaKnown RBP9.63□□□□□ -0.87
CMTM3-209ENST00000565003 CCDC88CQ9P219 2028 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 HECTD1Q9ULT8 2610 aa9.63□□□□□ -0.87
CMTM3-209ENST00000565003 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 A0A1B0GX78 115 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 SDR42E2A6NKP2 422 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 A6NL46 340 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ARHGEF33A8MVX0 844 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 H3BMM5 538 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 MASP2O00187 686 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 PGRMC1O00264 195 aaKnown RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 KIF5CO60282 957 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 MATN4O95460 622 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 UMODP07911 640 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ERGP11308 486 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 MLNP12872 115 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 PKMP14618 531 aaKnown RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 PAMP19021 973 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 CHRM3P20309 590 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ALAS2P22557 587 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ATP5DP30049 168 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 CCNFP41002 786 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 SLC1A2P43004 574 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 RAPSNQ13702 412 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 CYP2A13Q16696 494 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 KLHL38Q2WGJ6 581 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 NADK2Q4G0N4 442 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ANKRD20A4Q4UJ75 823 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ARMC3Q5W041 872 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 NEPROQ6NW34 567 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 TTLL10Q6ZVT0 673 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 DENND6AQ8IWF6 608 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 REXO1L1PQ8IX06 675 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 SLC35F6Q8N357 371 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 OR2A1Q8NGT9 310 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 OR2Y1Q8NGV0 311 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 GIMAP7Q8NHV1 300 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 HMGCLL1Q8TB92 370 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 FOPNLQ96NB1 174 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF285Q96NJ3 590 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 OSBPL9Q96SU4 736 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 SLC30A3Q99726 388 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 XAB2Q9HCS7 855 aaKnown RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 INTS7Q9NVH2 962 aaKnown RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 SAMD15Q9P1V8 674 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 NDOR1Q9UHB4 597 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 GPN3Q9UHW5 284 aaPredicted RBP9.62□□□□□ -0.87
CMTM3-209ENST00000565003 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 DOPEY2Q9Y3R5 2298 aa9.62□□□□□ -0.87
CMTM3-209ENST00000565003 CYSRT1A8MQ03 144 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 TARM1B6A8C7 271 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 E5RI56 91 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 MYO1CO00159 1063 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 PFDN6O15212 129 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 PHF2O75151 1096 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 PSIP1O75475 530 aaKnown RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 USP1O94782 785 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SORBS2O94875 1100 aaKnown RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 FKBP9O95302 570 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms