RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TRIM55Q9BYV6 548 aa19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 EURLQ9NYK6 297 aa19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 DHCR7Q9UBM7 475 aaKnown RBP19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 TCFL5Q9UL49 500 aa19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 TP53TG5Q9Y2B4 290 aa19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 AP1M2Q9Y6Q5 423 aa19.21■□□□□ 0.67
SHCBP1-203ENST00000564272 ARHGEF33A8MVX0 844 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 K7EM74 188 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 PRICKLE3O43900 615 aaPredicted RBP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 PTGIRP43119 386 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 GNG11P61952 73 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 MPP1Q00013 466 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 CHAF1BQ13112 559 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 SF1Q15637 639 aaKnown RBP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 KLHL38Q2WGJ6 581 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 LACTB2Q53H82 288 aaPredicted RBP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 RHBDD2Q6NTF9 364 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 RAB42Q8N4Z0 105 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 ADAMTS17Q8TE56 1095 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 THAP4Q8WY91 577 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 SLCO2A1Q92959 643 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 GBP5Q96PP8 586 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 MIPEPQ99797 713 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 DPH2Q9BQC3 489 aaPredicted RBP19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 SPATA7Q9P0W8 599 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 PCYOX1Q9UHG3 505 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 TLK1Q9UKI8 766 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 MED16Q9Y2X0 877 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 MRFAP1Q9Y605 127 aa19.2■□□□□ 0.66
SHCBP1-203ENST00000564272 ARGFXA6NJG6 315 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 C9J4A7 227 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 PGAM1P18669 254 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 AGXTP21549 392 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 GRIA3P42263 894 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 DHX9Q08211 1270 aaKnown RBP19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 CUL1Q13616 776 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 FASTKQ14296 549 aaKnown RBP19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 SLC9A5Q14940 896 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 MSS51Q4VC12 460 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 TLDC1Q6P9B6 456 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 FIGLAQ6QHK4 219 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 MCATQ8IVS2 390 aaKnown RBP19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 KLHL7Q8IXQ5 586 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 IARS2Q9NSE4 1012 aaKnown RBP19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 INTS7Q9NVH2 962 aaKnown RBP19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 FBXO5Q9UKT4 447 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 SRPK3Q9UPE1 567 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 FAM169AQ9Y6X4 670 aa19.19■□□□□ 0.66
SHCBP1-203ENST00000564272 A0A1W2PPV9 198 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 MKRN2OSH3BPM6 223 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 NRP2O60462 931 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 CRYMQ14894 314 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 HSP90AA5PQ58FG0 334 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 COLEC12Q5KU26 742 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 PAPD7Q5XG87 772 aaKnown RBP19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 KCNMB4Q86W47 210 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 CREG2Q8IUH2 290 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 APLFQ8IW19 511 aaPredicted RBP19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 HMGCLL1Q8TB92 370 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 PROKR1Q8TCW9 393 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 CALML6Q8TD86 181 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 MAGEC3Q8TD91 643 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 KCNJ9Q92806 393 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 NAPGQ99747 312 aaPredicted RBP19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 FAM167BQ9BTA0 163 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 CCDC68Q9H2F9 335 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 TXLNGQ9NUQ3 528 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 TENM4Q6N022 2769 aa19.18■□□□□ 0.66
SHCBP1-203ENST00000564272 MYO1CO00159 1063 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 PSIP1O75475 530 aaKnown RBP19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 HAUS5O94927 633 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 MCM3P25205 808 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 IVDP26440 423 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 YBX1P67809 324 aaKnown RBP19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 CYP2A13Q16696 494 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 TTLL9Q3SXZ7 439 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 MLIPQ5VWP3 458 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 LMNTD2Q8IXW0 634 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 OR2L3Q8NG85 312 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 OR9A1PQ8NGU1 263 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 CD200R1Q8TD46 325 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 GPR21Q99679 349 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 NDC1Q9BTX1 674 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 PCSK5Q92824 1860 aa19.17■□□□□ 0.66
SHCBP1-203ENST00000564272 FANCGO15287 622 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 CTSVO60911 334 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 FKBP9O95302 570 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 CATP04040 527 aaKnown RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 PDGFAP04085 211 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 ERVK-10P10266 1014 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 ERGP11308 486 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 GCGRP47871 477 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 FOXL2P58012 376 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 DCDP81605 110 aaKnown RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 TCTN3Q6NUS6 607 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 PCGF5Q86SE9 256 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 IGDCC3Q8IVU1 814 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms