RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 I3L1I5 382 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CAPN9O14815 690 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 STX6O43752 255 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 GPR137BO60478 399 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SELENOFO60613 162 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 KINO60870 393 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CTSVO60911 334 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF432O94892 652 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 GSRP00390 522 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 TFAP2AP05549 437 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 LIPFP07098 398 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 DANCRP0C864 163 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CKMT2P17540 419 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CBLP22681 906 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 KRT2P35908 639 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SLC9A3P48764 834 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 GSDMDP57764 484 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 YBEYP58557 167 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 FOLH1Q04609 750 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 VEZF1Q14119 521 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 LASP1Q14847 261 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 KIR2DS3Q14952 304 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 TYSND1Q2T9J0 566 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SLC39A12Q504Y0 691 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 FAM76BQ5HYJ3 339 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SIRPB2Q5JXA9 342 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 PDSS1Q5T2R2 415 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 NDUFAF5Q5TEU4 345 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 PLBD1Q6P4A8 553 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 KLC3Q6P597 504 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF449Q6P9G9 518 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 ENPP7Q6UWV6 458 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 MSANTD1Q6ZTZ1 278 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 KCTD9Q7L273 389 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 DGLUCYQ7Z3D6 616 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 PIGWQ7Z7B1 504 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 LONP2Q86WA8 852 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 COMMD2Q86X83 199 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 PTOV1Q86YD1 416 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CROCCP3Q8IVE0 287 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 L3MBTL4Q8NA19 623 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 OR13A1Q8NGR1 328 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 VANGL1Q8TAA9 524 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 OCC1Q8TAD7 63 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SEPT1Q8WYJ6 367 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 MOB3AQ96BX8 217 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 AK8Q96MA6 479 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 C17orf77Q96MU5 243 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 PRAM1Q96QH2 718 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 FEVQ99581 238 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 LMF2Q9BU23 707 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 S1PR5Q9H228 398 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 SNX25Q9H3E2 840 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 THAP9Q9H5L6 903 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 IARS2Q9NSE4 1012 aaKnown RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 ERAP1Q9NZ08 941 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 CNIH4Q9P003 139 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 NME7Q9Y5B8 376 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A1W2PPQ1 181 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ELOVL7A1L3X0 281 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LRRD1A4D1F6 860 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CCDC188H7C350 402 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 DDX39AO00148 427 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PSMD14O00487 310 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PTGESO14684 152 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CTDSPLO15194 276 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PPIP5K2O43314 1243 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 GRID2O43424 1007 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 XPNPEP2O43895 674 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 OR10H2O60403 315 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PGLSO95336 258 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 SBK2P0C263 348 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PLA2G4BP0C869 781 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ITIH1P19827 911 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CASTP20810 708 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 SP100P23497 879 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 MARK3P27448 753 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LHX1P48742 406 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 MTCP1P56278 107 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PNRC1Q12796 327 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 DUOXA1Q1HG43 343 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CTU2Q2VPK5 515 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 IQCCQ4KMZ1 466 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LACTB2Q53H82 288 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 RAB12Q6IQ22 244 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CASC4Q6P4E1 433 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PODNL1Q6PEZ8 512 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 FAM198BQ6UWH4 519 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LINGO4Q6UY18 593 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 GDPD4Q6W3E5 623 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LINC00696Q6ZRV3 163 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF329Q86UD4 541 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 FOXP4Q8IVH2 680 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 GPALPP1Q8IXQ4 340 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CDK20Q8IZL9 346 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 APCDD1Q8J025 514 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF611Q8N823 705 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 LMNTD1Q8N9Z9 388 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms