RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ALKBH8Q96BT7 664 aaKnown RBP18.2■□□□□ 0.5
RAB40C-207ENST00000563109 APOPT1Q96IL0 206 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 ATOH8Q96SQ7 321 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 MRPL57Q9BQC6 102 aaKnown RBP18.2■□□□□ 0.5
RAB40C-207ENST00000563109 ACBD3Q9H3P7 528 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 ZNF358Q9NW07 568 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 WWOXQ9NZC7 414 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 KLHL3Q9UH77 587 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 POMT2Q9UKY4 750 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 TMCO1Q9UM00 188 aa18.2■□□□□ 0.5
RAB40C-207ENST00000563109 TLCD2A6NGC4 264 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 TMX2-CTNND1H3BSU7 103 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CASC3O15234 703 aaKnown RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SMIM24O75264 130 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 RASSF9O75901 435 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CCNDBP1O95273 360 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 MT-CO3P00414 261 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 C9P02748 559 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 GFAPP14136 432 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 UGT2B7P16662 529 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 INHBCP55103 352 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 TBPL1P62380 186 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CFHR1Q03591 330 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SLC18A2Q05940 514 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 FASTKQ14296 549 aaKnown RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SNAP47Q5SQN1 464 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CDCP2Q5VXM1 449 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SULT1C3Q6IMI6 304 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CAPN13Q6MZZ7 669 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SPESP1Q6UW49 350 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 FAM92BQ6ZTR7 304 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 COL27A1Q8IZC6 1860 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 GALNT15Q8N3T1 639 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 GOLGA6L1Q8N7Z2 621 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 PDPRQ8NCN5 879 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 PPFIBP2Q8ND30 876 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 ZBTB9Q96C00 473 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 ATG10Q9H0Y0 220 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CNOT10Q9H9A5 744 aaKnown RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 ABCF3Q9NUQ8 709 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 MKS1Q9NXB0 559 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 SPHK1Q9NYA1 384 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CPSF2Q9P2I0 782 aaKnown RBP18.19■□□□□ 0.5
RAB40C-207ENST00000563109 CLCA2Q9UQC9 943 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 PCDHB11Q9Y5F2 797 aa18.19■□□□□ 0.5
RAB40C-207ENST00000563109 E7ENX8 843 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 UBXN8O00124 270 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 IPO13O94829 963 aaKnown RBP18.18■□□□□ 0.5
RAB40C-207ENST00000563109 HOXB3P14651 431 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TAC1P20366 129 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 CDH3P22223 829 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 MPSTP25325 297 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 PRDX3P30048 256 aaKnown RBP18.18■□□□□ 0.5
RAB40C-207ENST00000563109 CRHR1P34998 444 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 PPP1CAP62136 330 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TAP2Q03519 686 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 NAE1Q13564 534 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TRA2AQ13595 282 aaKnown RBP eCLIP18.18■□□□□ 0.5
RAB40C-207ENST00000563109 SLC5A12Q1EHB4 618 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-207ENST00000563109 PRAMEF13Q5VWM6 474 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 SUSD1Q6UWL2 747 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 SH2D5Q6ZV89 423 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 PRSS42Q7Z5A4 293 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TMPRSS12Q86WS5 348 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 CARFQ8N187 725 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 LMNTD1Q8N9Z9 388 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 RHBDF1Q96CC6 855 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 CCDC74BQ96LY2 380 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 STRADBQ9C0K7 418 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 PCBD2Q9H0N5 130 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TMEM216Q9P0N5 145 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 GRID1Q9ULK0 1009 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 UNC13CQ8NB66 2214 aa18.18■□□□□ 0.5
RAB40C-207ENST00000563109 IGHV5-10-1A0A0J9YXX1 117 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 A0A0J9YY10 115 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 TK2O00142 265 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-207ENST00000563109 CSO75390 466 aaKnown RBP18.17■□□□□ 0.5
RAB40C-207ENST00000563109 FKBP9O95302 570 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 THRAP10827 490 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 CMPK1P30085 196 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 PEBP1P30086 187 aaKnown RBP18.17■□□□□ 0.5
RAB40C-207ENST00000563109 NAA25Q14CX7 972 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 SF1Q15637 639 aaKnown RBP18.17■□□□□ 0.5
RAB40C-207ENST00000563109 CCDC153Q494R4 210 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 CACHD1Q5VU97 1274 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 TMPRSS9Q7Z410 1059 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 SLITRK4Q8IW52 837 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 FBXO39Q8N4B4 442 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 OR2A14Q96R47 310 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 SEMA6CQ9H3T2 930 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 TMBIM4Q9HC24 238 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 C1GALT1Q9NS00 363 aa18.17■□□□□ 0.5
RAB40C-207ENST00000563109 INTS7Q9NVH2 962 aaKnown RBP18.17■□□□□ 0.5
RAB40C-207ENST00000563109 AKAP7Q9P0M2 348 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms