RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RHBDD2Q6NTF9 364 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 TTC23LQ6PF05 361 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 DENND6AQ8IWF6 608 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZBTB2Q8N680 514 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 DENND1AQ8TEH3 1009 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 GRK7Q8WTQ7 553 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 SLC22A18Q96BI1 424 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 FOPNLQ96NB1 174 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 GBP5Q96PP8 586 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 DPH2Q9BQC3 489 aaPredicted RBP16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 FBXO6Q9NRD1 293 aaPredicted RBP16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 EURLQ9NYK6 297 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 ANAPC2Q9UJX6 822 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 SRPK3Q9UPE1 567 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 MAD1L1Q9Y6D9 718 aa16.54■□□□□ 0.24
CDC42BPB-208ENST00000561271 ZCWPW2A0A1B0GU75 182 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 E5RI56 91 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 PKMP14618 531 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 CHRM3P20309 590 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 ATP5DP30049 168 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 CASRP41180 1078 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 SLC1A2P43004 574 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 ADARP55265 1226 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 KCNC4Q03721 635 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 THOC5Q13769 683 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 PPP1R7Q15435 360 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 SF1Q15637 639 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 ACSBG2Q5FVE4 666 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 FCRL6Q6DN72 434 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 TCTN3Q6NUS6 607 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 TLDC1Q6P9B6 456 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 ASB18Q6ZVZ8 466 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 NAT8LQ8N9F0 302 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 PROKR1Q8TCW9 393 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 DDX47Q9H0S4 455 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 ACSS2Q9NR19 701 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 INTS7Q9NVH2 962 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 INTS10Q9NVR2 710 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 PADI2Q9Y2J8 665 aa16.53■□□□□ 0.24
CDC42BPB-208ENST00000561271 HECTD1Q9ULT8 2610 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 CTAGE9A4FU28 777 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 ARHGEF33A8MVX0 844 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 PRICKLE3O43900 615 aaPredicted RBP16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 NRP2O60462 931 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 USP1O94782 785 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 MATN4O95460 622 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 MCM3P25205 808 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 OTX2P32243 289 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 CCNFP41002 786 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 GRIA3P42263 894 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 CSRP3P50461 194 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 FOXL2P58012 376 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 CTBP1Q13363 440 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 CUL1Q13616 776 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 ATP1A4Q13733 1029 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 RNASEH2BQ5TBB1 312 aaKnown RBP16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 MLIPQ5VWP3 458 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 FIGLAQ6QHK4 219 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 PPIL6Q8IXY8 311 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 RAB42Q8N4Z0 105 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 GIMAP7Q8NHV1 300 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 SIGLEC10Q96LC7 697 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 SLC30A3Q99726 388 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 MIPEPQ99797 713 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 NDC1Q9BTX1 674 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 ING2Q9H160 280 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 ASIC3Q9UHC3 531 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 VPS9D1Q9Y2B5 631 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 MRFAP1Q9Y605 127 aa16.52■□□□□ 0.24
CDC42BPB-208ENST00000561271 LRRK2Q5S007 2527 aa16.52■□□□□ 0.23
CDC42BPB-208ENST00000561271 ESPL1Q14674 2120 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 CPAMD8Q8IZJ3 1885 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 CES2O00748 559 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 BANF1O75531 89 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 KLF7O75840 302 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 GCGRP47871 477 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 CCL11P51671 97 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 CLCN7P51798 805 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 MPP1Q00013 466 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 KLRB1Q12918 225 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 FASTKQ14296 549 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 LONRF1Q17RB8 773 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 KLHL38Q2WGJ6 581 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 RAB43Q86YS6 212 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 MCATQ8IVS2 390 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 TMEM151BQ8IW70 566 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR2L3Q8NG85 312 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 HMGCLL1Q8TB92 370 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 DHRS4Q9BTZ2 278 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 SLC25A23Q9BV35 468 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 C20orf96Q9NUD7 363 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 SPATA7Q9P0W8 599 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 NDOR1Q9UHB4 597 aa16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 GPN3Q9UHW5 284 aaPredicted RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 MED16Q9Y2X0 877 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms