RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 KCTD4Q8WVF5 259 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 RHBDF1Q96CC6 855 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
IRF9-211ENST00000560852 DEPDC7Q96QD5 511 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 SARGQ9BW04 601 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 ZNF768Q9H5H4 540 aaKnown RBP11.71□□□□□ -0.53
IRF9-211ENST00000560852 ACTR10Q9NZ32 417 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 ANKMY1Q9P2S6 941 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 GRID1Q9ULK0 1009 aa11.71□□□□□ -0.53
IRF9-211ENST00000560852 TDRKHQ9Y2W6 561 aaKnown RBP11.71□□□□□ -0.53
IRF9-211ENST00000560852 ASXL3Q9C0F0 2248 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SBK3P0C264 359 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 PYGBP11216 843 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 KRT15P19012 456 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SLCO1A2P46721 670 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SLC18A1P54219 525 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SHC2P98077 582 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 NFKB2Q00653 900 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 IRF9Q00978 393 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
IRF9-211ENST00000560852 NKAIN2Q5VXU1 208 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SPESP1Q6UW49 350 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 USP53Q70EK8 1073 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 HDXQ7Z353 690 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 BPHLQ86WA6 291 aaPredicted RBP11.7□□□□□ -0.54
IRF9-211ENST00000560852 D2HGDHQ8N465 521 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 UBTD2Q8WUN7 234 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 NCSTNQ92542 709 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 MIPEPQ99797 713 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 VPS11Q9H270 941 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 MRPL46Q9H2W6 279 aaKnown RBP11.7□□□□□ -0.54
IRF9-211ENST00000560852 SEMA6CQ9H3T2 930 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 ARL15Q9NXU5 204 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 SPHK1Q9NYA1 384 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 NUDT4Q9NZJ9 180 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 TBK1Q9UHD2 729 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 CLCA2Q9UQC9 943 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 BTRCQ9Y297 605 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 PCDHB11Q9Y5F2 797 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 PCDHGA8Q9Y5G5 932 aa11.7□□□□□ -0.54
IRF9-211ENST00000560852 TLDC2A0PJX2 215 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 NPEPPSL1A6NEC2 478 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 STX16-NPEPL1H3BU86 382 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 AGPSO00116 658 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 STX16O14662 325 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 CASC3O15234 703 aaKnown RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 TAPBPO15533 448 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 TYROBPO43914 113 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 GLRA3O75311 464 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ZBTB11O95625 1053 aaPredicted RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 NPPBP16860 134 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 TYRP1P17643 537 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 NELFEP18615 380 aaKnown RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 KRT4P19013 534 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 POLR2CP19387 275 aaPredicted RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 ALDH18A1P54886 795 aaKnown RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 INHBCP55103 352 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 PCBP2Q15366 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
IRF9-211ENST00000560852 KRT71Q3SY84 523 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 AMZ1Q400G9 498 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 CCDC153Q494R4 210 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 HES3Q5TGS1 186 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 LCTLQ6UWM7 567 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ERMP1Q7Z2K6 904 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 SPATA6LQ8N4H0 392 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ABHD11Q8NFV4 315 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 OR4K1Q8NGD4 311 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 IL17FQ96PD4 163 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 FCRL4Q96PJ5 515 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 SH3GL2Q99962 352 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 HAUS8Q9BT25 410 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 NRSN2Q9GZP1 204 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 XKR8Q9H6D3 395 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 ALG9Q9H6U8 611 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 INTS7Q9NVH2 962 aaKnown RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 GPRC5BQ9NZH0 403 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 TMEM216Q9P0N5 145 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 COPG2Q9UBF2 871 aa11.69□□□□□ -0.54
IRF9-211ENST00000560852 TNPO3Q9Y5L0 923 aaKnown RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
IRF9-211ENST00000560852 GOLGA4Q13439 2230 aaKnown RBP11.68□□□□□ -0.54
IRF9-211ENST00000560852 A0A0J9YY10 115 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 B4E171 279 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 RGS16O15492 202 aaPredicted RBP11.68□□□□□ -0.54
IRF9-211ENST00000560852 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
IRF9-211ENST00000560852 CCNDBP1O95273 360 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 ADRB1P08588 477 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 UGT2B7P16662 529 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 GMPRP36959 345 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 TSPAN7P41732 249 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 CASP2P42575 452 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 LSSP48449 732 aa11.68□□□□□ -0.54
IRF9-211ENST00000560852 GFERP55789 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms