RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 GPAMQ9HCL2 828 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 PDE7BQ9NP56 450 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-205ENST00000558428 ADAMTS6Q9UKP5 1117 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 RARRES3Q9UL19 164 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 CFAP47Q6ZTR5 3102 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 CACNA1BQ00975 2339 aa11.93□□□□□ -0.5
SMAD3-205ENST00000558428 ZNF839A8K0R7 811 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 STMND1H3BQB6 276 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SLC16A5O15375 505 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SLC16A8O95907 504 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 LIPCP11150 499 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 ERGP11308 486 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PSMB5P28074 263 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 HSD17B2P37059 387 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 TUBB4BP68371 445 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 TSTA3Q13630 321 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-205ENST00000558428 ARHGAP19Q14CB8 494 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SF1Q15637 639 aaKnown RBP11.92□□□□□ -0.5
SMAD3-205ENST00000558428 GPR19Q15760 415 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 CEP97Q8IW35 865 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 FAM20CQ8IXL6 584 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SYTL1Q8IYJ3 562 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 HMGCLL1Q8TB92 370 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 RNF31Q96EP0 1072 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 TSPAN17Q96FV3 270 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SLC12A9Q9BXP2 914 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 ACSS3Q9H6R3 686 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 FANCEQ9HB96 536 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 POPDC3Q9HBV1 291 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 SYTL2Q9HCH5 934 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 FGF21Q9NSA1 209 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PDE10AQ9Y233 779 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PTPRQQ9UMZ3 2332 aa11.92□□□□□ -0.5
SMAD3-205ENST00000558428 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 A0A087WV48 116 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 A0A1W2PPV9 198 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 PABPN1LA6NDY0 278 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 KLK10O43240 276 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 STK17BO94768 372 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 FKBP9O95302 570 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 FGF5P12034 268 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 STMN1P16949 149 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 MAGP20916 626 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 CLN3Q13286 438 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 TGIF1Q15583 401 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 ZIC1Q15915 447 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 UAP1Q16222 522 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 SUSD1Q6UWL2 747 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 GSPT2Q8IYD1 628 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 ANKRD49Q8WVL7 239 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 N4BP2L2Q92802 583 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 PDLIM5Q96HC4 596 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 MIPEPQ99797 713 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 FUT8Q9BYC5 575 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 DPH1Q9BZG8 443 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 ABCF3Q9NUQ8 709 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 INTS7Q9NVH2 962 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 KLHL20Q9Y2M5 609 aa11.91□□□□□ -0.5
SMAD3-205ENST00000558428 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
SMAD3-205ENST00000558428 MDC1Q14676 2089 aaKnown RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 NPEPPSL1A6NEC2 478 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 TMEM150CB9EJG8 249 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 E7ENX8 843 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 PRICKLE3O43900 615 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 RAD1O60671 282 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 KIAA0754O94854 1291 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 FAM153BP0C7A2 387 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 ITPKBP27987 946 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 IMPA1P29218 277 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 CMPK1P30085 196 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 RPA3P35244 121 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 RAB10P61026 200 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 TAP2Q03519 686 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 PHKG1Q16816 387 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 FAM153CQ494X1 144 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 KIAA1614Q5VZ46 1190 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 MBOAT1Q6ZNC8 495 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 CDHR3Q6ZTQ4 885 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms