RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 VPS39Q96JC1 886 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 NDNQ99608 321 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 OR2AG1Q9H205 316 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 CNOT10Q9H9A5 744 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 MAGEE1Q9HCI5 957 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 LNPEPQ9UIQ6 1025 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 KCND3Q9UK17 655 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 VPS4AQ9UN37 437 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF711Q9Y462 761 aa10.88□□□□□ -0.67
RABGGTA-204ENST00000558376 DOPEY1Q5JWR5 2465 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 C1orf232A0A0U1RR37 186 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 TOX3O15405 576 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RECKO95980 971 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 VIPP01282 170 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RPL26P61254 145 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 IRF9Q00978 393 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 ACVR1Q04771 509 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PLA2G4EQ3MJ16 856 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 NADK2Q4G0N4 442 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CACHD1Q5VU97 1274 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 TIFABQ6ZNK6 161 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 ADGRG6Q86SQ4 1221 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CILP2Q8IUL8 1156 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PIANPQ8IYJ0 282 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 AVL9Q8NBF6 648 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CPT1CQ8TCG5 803 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RSC1A1Q92681 617 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 UNKQ9C0B0 810 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 VPS11Q9H270 941 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 OSGEPL1Q9H4B0 414 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 ZFYVE1Q9HBF4 777 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RPL26L1Q9UNX3 145 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CELSR2Q9HCU4 2923 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RGSL1A5PLK6 1076 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 COPEO14579 308 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PRPF4O43172 522 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■□□□□ 10
RABGGTA-204ENST00000558376 PHGDHO43175 533 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 SHOX2O60902 331 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RASSF9O75901 435 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PPP1CAP62136 330 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 NAB1Q13506 487 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 RBM20Q5T481 1227 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CPZQ66K79 652 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM92BQ6ZTR7 304 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PRSS42Q7Z5A4 293 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PHYKPLQ8IUZ5 450 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PLD6Q8N2A8 252 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 GPATCH11Q8N954 259 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM136AQ96C01 138 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 MTBPQ96DY7 904 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM111AQ96PZ2 611 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 SRPK1Q96SB4 655 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 TRIM39Q9HCM9 518 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 LHX9Q9NQ69 397 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 SNX15Q9NRS6 342 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 NKIRAS1Q9NYS0 192 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 PKD2L2Q9NZM6 624 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 IL17CQ9P0M4 197 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 SENP1Q9P0U3 644 aa10.87□□□□□ -0.67
RABGGTA-204ENST00000558376 CRYBG3Q68DQ2 2970 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 CHUKO15111 745 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 OR1I1O60431 355 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF7P17097 686 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 UGT1A6P19224 532 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 UGT1A1P22309 533 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 UGT1A4P22310 534 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 CNTFP26441 200 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 MC4RP32245 332 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 FOXN2P32314 431 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 HMGCLP35914 325 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 RPS18P62269 152 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 CHAF1BQ13112 559 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 LAMB3Q13751 1172 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 USP10Q14694 798 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 SEPT7Q16181 437 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 ZRANB3Q5FWF4 1079 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM199XQ6PEV8 388 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 ABRAXAS1Q6UWZ7 409 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 PPP1R3BQ86XI6 285 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 ZNF547Q8IVP9 402 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 TRIM48Q8IWZ4 208 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 GPR26Q8NDV2 337 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 DYDC1Q8WWB3 177 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 FAM167BQ9BTA0 163 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 RHOJQ9H4E5 214 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 SLC40A1Q9NP59 571 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 CATSPERZQ9NTU4 200 aa10.86□□□□□ -0.67
RABGGTA-204ENST00000558376 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms