RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CBSLP0DN79 551 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 MYBL2P10244 700 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 LIPCP11150 499 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 FGF5P12034 268 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 ENO3P13929 434 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 MAGP20916 626 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CBSP35520 551 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CCNFP41002 786 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 ARL4DP49703 201 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 RAB15P59190 212 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 KIR2DS3Q14952 304 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 FAM153CQ494X1 144 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 FCRL6Q6DN72 434 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CEACAM20Q6UY09 585 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CYS1Q717R9 158 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 KMT5CQ86Y97 462 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CTAGE3PQ8IX95 158 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 LRRC56Q8IYG6 542 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SPATA6LQ8N4H0 392 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 C19orf47Q8N9M1 422 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 NKD1Q969G9 470 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 RBBP8Q99708 897 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 MIPEPQ99797 713 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 ACAT2Q9BWD1 397 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SYNPO2LQ9H987 977 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 AKIRIN1Q9H9L7 192 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CPNE5Q9HCH3 593 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SPATA7Q9P0W8 599 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 PILRAQ9UKJ1 303 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 RALYQ9UKM9 306 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CORO1CQ9ULV4 474 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 DSPP15924 2871 aaKnown RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 HMX2A2RU54 273 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 CDC7O00311 574 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 RRP8O43159 456 aaKnown RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ZNF500O60304 480 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 RAD1O60671 282 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ACSL3O95573 720 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 NTRK1P04629 796 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ZNF37AP17032 561 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 IMPA1P29218 277 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 GP5P40197 560 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 GRIA3P42263 894 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 BMPR2Q13873 1038 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SLC5A12Q1EHB4 618 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 TEX35Q5T0J7 233 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 TMEM164Q5U3C3 297 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 UGT3A1Q6NUS8 523 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 TTC23LQ6PF05 361 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 RELL1Q8IUW5 271 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SLC38A9Q8NBW4 561 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 GALNT6Q8NCL4 622 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 FBXO15Q8NCQ5 510 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 HMGCLL1Q8TB92 370 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 FCRL4Q96PJ5 515 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 RUFY1Q96T51 708 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 FMO2Q99518 471 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 GPR22Q99680 433 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 CPNE1Q99829 537 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ASPSCR1Q9BZE9 553 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ULBP3Q9BZM4 244 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SPRTNQ9H040 489 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 ABCF3Q9NUQ8 709 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 RARRES3Q9UL19 164 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 SH2B3Q9UQQ2 575 aa11.9□□□□□ -0.5
SYNE2-214ENST00000554928 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-214ENST00000554928 IGKV1-8A0A0C4DH67 115 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 LOC101059948A0A1B0GTJ6 334 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 NPEPPSL1A6NEC2 478 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 TMEM150CB9EJG8 249 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 E7ENX8 843 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 H3BMH7 237 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 STMND1H3BQB6 276 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
SYNE2-214ENST00000554928 F8A1P23610 371 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 OAS2P29728 719 aaKnown RBP11.89□□□□□ -0.51
SYNE2-214ENST00000554928 STX2P32856 288 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 RGS4P49798 205 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 IL2P60568 153 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 TUBB4BP68371 445 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 ACY1Q03154 408 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 TAP2Q03519 686 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
SYNE2-214ENST00000554928 IL11RAQ14626 422 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
SYNE2-214ENST00000554928 LCN10Q6JVE6 187 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
SYNE2-214ENST00000554928 LRRC69Q6ZNQ3 347 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms