RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 HIBCHQ6NVY1 386 aaPredicted RBP11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 FAM198BQ6UWH4 519 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 TTLL10Q6ZVT0 673 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 SYDE1Q6ZW31 735 aaPredicted RBP11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 DCUN1D3Q8IWE4 304 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 PPIL6Q8IXY8 311 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 ZBTB2Q8N680 514 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 METTL27Q8N6F8 245 aaPredicted RBP11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 LINC01555Q8NAE3 123 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 P2RY12Q9H244 342 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 EURLQ9NYK6 297 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 GALPQ9UBC7 116 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 AP1M2Q9Y6Q5 423 aa11.85□□□□□ -0.51
CCDC85C-202ENST00000554877 TLN1Q9Y490 2541 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 E5RI56 91 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 KPNA5O15131 536 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 SLCO2B1O94956 709 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 MCM3P25205 808 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 FOLR3P41439 243 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 TYSND1Q2T9J0 566 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 NADK2Q4G0N4 442 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 CTSL3PQ5NE16 218 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 KIAA0930Q6ICG6 404 aaPredicted RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 NEPROQ6NW34 567 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 TLDC1Q6P9B6 456 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 UNC5DQ6UXZ4 953 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 ZNF517Q6ZMY9 492 aaPredicted RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 RAB43Q86YS6 212 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 APLFQ8IW19 511 aaPredicted RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 RAB42Q8N4Z0 105 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 SPATA4Q8NEY3 305 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 OR2L8Q8NGY9 312 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 RAD51AP1Q96B01 352 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 SLC22A18Q96BI1 424 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 TRIM51Q9BSJ1 452 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 INTS7Q9NVH2 962 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 STOX2Q9P2F5 926 aaPredicted RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 PADI2Q9Y2J8 665 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 MAD1L1Q9Y6D9 718 aa11.84□□□□□ -0.51
CCDC85C-202ENST00000554877 TENM4Q6N022 2769 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 A0A0J9YVX5 310 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 SDR42E2A6NKP2 422 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 PEX12O00623 359 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 RASGRF2O14827 1237 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 SEC31AO94979 1220 aaKnown RBP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 C1orf105O95561 183 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 SYF2O95926 243 aaKnown RBP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 PAMP19021 973 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 RPS3P23396 243 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 CASQ1P31415 396 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 GABRA4P48169 554 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 VSX2P58304 361 aaPredicted RBP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 FOXK1P85037 733 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 DR1Q01658 176 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 CTBP1Q13363 440 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 GRB7Q14451 532 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 NKAIN1Q4KMZ8 207 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 ACSBG2Q5FVE4 666 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 FCRL6Q6DN72 434 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 IGDCC3Q8IVU1 814 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 KLHL7Q8IXQ5 586 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 RUNDC3BQ96NL0 473 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 BIRC8Q96P09 236 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 SELENOSQ9BQE4 189 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 YIPF2Q9BWQ6 316 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 FBXO6Q9NRD1 293 aaPredicted RBP11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 MAU2Q9Y6X3 613 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
CCDC85C-202ENST00000554877 BANF1O75531 89 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 USP1O94782 785 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 S1PR4O95977 384 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 MSL3P1P0C860 447 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 PKMP14618 531 aaKnown RBP11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 OR1D4P47884 311 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 RRADP55042 308 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 CUL1Q13616 776 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 FASTKQ14296 549 aaKnown RBP11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 GBX1Q14549 363 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 SSPNQ14714 243 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 MORF4L2Q15014 288 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 PPP1R7Q15435 360 aa11.82□□□□□ -0.52
CCDC85C-202ENST00000554877 KLHL38Q2WGJ6 581 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms