RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ZBTB37Q5TC79 503 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 LAMTOR1Q6IAA8 161 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 SLC46A3Q7Z3Q1 461 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 HERVK_113Q902F9 699 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 Q96MT0 163 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TTLL2Q9BWV7 592 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TNKS2Q9H2K2 1166 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TMEM39AQ9NV64 488 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 SMPD4Q9NXE4 827 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 ERVW-1Q9UQF0 538 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 MBLAC1A4D2B0 266 aaPredicted RBP15.29■□□□□ 0.04
SYNE3-203ENST00000554873 MEIS3P2A8K0S8 358 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 PIP5K1BO14986 540 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 NPPAP01160 153 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 CDH13P55290 713 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 PRSS36Q5K4E3 855 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TIGD7Q6NT04 549 aaPredicted RBP15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TMEM207Q6UWW9 146 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 KIF18BQ86Y91 864 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 FAM86B1Q8N7N1 296 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 C2orf69Q8N8R5 385 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
SYNE3-203ENST00000554873 FNDC5Q8NAU1 212 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 ISG20Q96AZ6 181 aaKnown RBP15.29■□□□□ 0.04
SYNE3-203ENST00000554873 TUBGCP3Q96CW5 907 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 MAGEB10Q96LZ2 347 aaPredicted RBP15.29■□□□□ 0.04
SYNE3-203ENST00000554873 GPR45Q9Y5Y3 372 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 PTGDR2Q9Y5Y4 395 aa15.29■□□□□ 0.04
SYNE3-203ENST00000554873 OR5K4A6NMS3 321 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TRIM3O75382 744 aaPredicted RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 SLC22A5O76082 557 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 CYBBP04839 570 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TNNI3P19429 210 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 SMN1Q16637 294 aaKnown RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TIGD6Q17RP2 521 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 HECTD2Q5U5R9 776 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 PRSS42Q7Z5A4 293 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TMEM179BQ7Z7N9 219 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 HIPK1Q86Z02 1210 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TWIST2Q8WVJ9 160 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TESCQ96BS2 214 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 SLC47A1Q96FL8 570 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 ALG9Q9H6U8 611 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 ATF6P18850 670 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TNFSF8P32971 234 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 LHX1P48742 406 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 SCNN1GP51170 649 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 AFF1P51825 1210 aaKnown RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 DBPQ10586 325 aaPredicted RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 HYAL2Q12891 473 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 PPP1R8Q12972 351 aaKnown RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 NKG7Q16617 165 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 ENPP6Q6UWR7 440 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 AHSA2Q719I0 299 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
SYNE3-203ENST00000554873 OR8H1Q8NGG4 311 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 FBXO30Q8TB52 745 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 NECTIN4Q96NY8 510 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 PRKD2Q9BZL6 878 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 PPA2Q9H2U2 334 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 ACTR8Q9H981 624 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 ASAH2Q9NR71 780 aa15.28■□□□□ 0.04
SYNE3-203ENST00000554873 TRIP12Q14669 1992 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 LINC00854A0A1B0GVQ3 168 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 SLC12A8A0AV02 714 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 B4DXG7 233 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 ATG13O75143 517 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 DDNO94850 711 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 COL6A1P12109 1028 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 IGFBP5P24593 272 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 CLCN5P51795 746 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 WNT3AP56704 352 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 TEKQ02763 1124 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 BAMBIQ13145 260 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 SIM2Q14190 667 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 GNA13Q14344 377 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 SLC14A2Q15849 920 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 TRIM60Q495X7 471 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 SETMARQ53H47 684 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 UNC50Q53HI1 259 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 ZNF678Q5SXM1 525 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 BRAT1Q6PJG6 821 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 TRIM48Q8IWZ4 208 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 ASB15Q8WXK1 588 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 RNF167Q9H6Y7 350 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 RNF121Q9H920 327 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 DYRK4Q9NR20 520 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 DIMT1Q9UNQ2 313 aaKnown RBP15.27■□□□□ 0.04
SYNE3-203ENST00000554873 GMPPBQ9Y5P6 360 aa15.27■□□□□ 0.04
SYNE3-203ENST00000554873 A0A0B4J293 547 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 PI15O43692 258 aa15.27■□□□□ 0.03
SYNE3-203ENST00000554873 MITFO75030 526 aaPredicted RBP15.27■□□□□ 0.03
SYNE3-203ENST00000554873 FGF4P08620 206 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms