RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ULK4Q96C45 1275 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 PGM2Q96G03 612 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 DCUN1D1Q96GG9 259 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TRAPPC9Q96Q05 1148 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 FERD3LQ96RJ6 166 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 NUDT9Q9BW91 350 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 SRMSQ9H3Y6 488 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TMBIM4Q9HC24 238 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 PIH1D1Q9NWS0 290 aaKnown RBP10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TCFL5Q9UL49 500 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 HEBP2Q9Y5Z4 205 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TEX264Q9Y6I9 313 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 COLEC10Q9Y6Z7 277 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 DOCK10Q96BY6 2186 aa10.23□□□□□ -0.77
SHMT2-215ENST00000554656 TTLL8A6PVC2 850 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 H3BQF6 201 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 H7C0S8 307 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 CTSBP07858 339 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 TPBGLP0DKB5 382 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 RALBP11234 206 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 TPH1P17752 444 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 GABRA4P48169 554 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 PRKAA1Q13131 559 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 PRKG2Q13237 762 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ATP1A4Q13733 1029 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 KRT33BQ14525 404 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ZIC1Q15915 447 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 KCTD19Q17RG1 926 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-215ENST00000554656 KRT71Q3SY84 523 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 CDHR3Q6ZTQ4 885 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF534Q76KX8 674 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 GALNT11Q8NCW6 608 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 FBXO36Q8NEA4 188 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 OR5AR1Q8NGP9 310 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 FLVCR1-AS1Q8TAF5 88 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 CLIP3Q96DZ5 547 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ATP6V1G3Q96LB4 118 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 SIGLEC10Q96LC7 697 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 C19orf43Q9BQ61 176 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 TFB2MQ9H5Q4 396 aaKnown RBP10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ACTR5Q9H9F9 607 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-215ENST00000554656 LRRC4CQ9HCJ2 640 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 FAM60AQ9NP50 221 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 CASS4Q9NQ75 786 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ACSS2Q9NR19 701 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-215ENST00000554656 ACTR10Q9NZ32 417 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 LUZP4Q9P127 313 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 SNX7Q9UNH6 387 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 PRSS21Q9Y6M0 314 aa10.22□□□□□ -0.77
SHMT2-215ENST00000554656 MAGEB16A2A368 324 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CCDC78A2IDD5 438 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 OR51F1A6NGY5 319 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 SDR42E2A6NKP2 422 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CFAP99D6REC4 459 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 GOLGA8MH3BSY2 632 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 MATN2O00339 956 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 RASGRF2O14827 1237 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF749O43361 778 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CNOT3O75175 753 aaKnown RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CDH16O75309 829 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 SEMA7AO75326 666 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ACSL3O95573 720 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 KLK3P07288 261 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CYP2A7P20853 494 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 PSMA3P25788 255 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ACADLP28330 430 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ATP5DP30049 168 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 HADHAP40939 763 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ELK3P41970 407 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 CD151P48509 253 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 NPY2RP49146 381 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 FOXL2P58012 376 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 RPA4Q13156 261 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 FRG1Q14331 258 aaKnown RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 NCF4Q15080 339 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 KLHL38Q2WGJ6 581 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 DEFB110Q30KQ9 67 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ZRANB3Q5FWF4 1079 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 STEAP4Q687X5 459 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF449Q6P9G9 518 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 SPESP1Q6UW49 350 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 NAPRTQ6XQN6 538 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 AMIGO1Q86WK6 493 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 PALM2Q8IXS6 379 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 RBMXL3Q8N7X1 1067 aaKnown RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 TFGQ92734 400 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 PWWP2AQ96N64 755 aa10.21□□□□□ -0.77
SHMT2-215ENST00000554656 EBNA1BP2Q99848 306 aaKnown RBP10.21□□□□□ -0.77
SHMT2-215ENST00000554656 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms