RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SLC2A11Q9BYW1 496 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 TFB2MQ9H5Q4 396 aaKnown RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 DNAJC4Q9NNZ3 241 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 ZFP57Q9NU63 452 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 DNAJB9Q9UBS3 223 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 POLLQ9UGP5 575 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 RIPK3Q9Y572 518 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 POMT1Q9Y6A1 747 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 KDM5CP41229 1560 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 POLR1AO95602 1720 aaPredicted RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 CLTCQ00610 1675 aaKnown RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 FLT1P17948 1338 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 MLH3Q9UHC1 1453 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 TRAV34A0A0B4J273 112 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 A0A1W2PPK0 400 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 FAM86B1E9PN63 330 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 KCNAB3O43448 404 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 CRYAAP02489 173 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 ATP1A1P05023 1023 aaKnown RBP4.76□□□□□ -1.65
CHD8-207ENST00000554384 FAM86B2P0C5J1 330 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 HAPLN1P10915 354 aaPredicted RBP4.76□□□□□ -1.65
CHD8-207ENST00000554384 HSPA8P11142 646 aaKnown RBP4.76□□□□□ -1.65
CHD8-207ENST00000554384 AMD1P17707 334 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 HOXC8P31273 242 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 PTGER4P35408 488 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 LHX1P48742 406 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 ZNF718Q3SXZ3 478 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 LINGO4Q6UY18 593 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 MFSD6Q6ZSS7 791 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 EXOC3L1Q86VI1 746 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 METTL23Q86XA0 190 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 PLD3Q8IV08 490 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 OR2T12Q8NG77 320 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 OR1J1Q8NGS3 322 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 ATL1Q8WXF7 558 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 EXOC4Q96A65 974 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 DHX58Q96C10 678 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 THOC1Q96FV9 657 aaKnown RBP4.76□□□□□ -1.65
CHD8-207ENST00000554384 ZNF354BQ96LW1 612 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 SGK494Q96LW2 274 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 INTS14Q96SY0 518 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 CCDC3Q9BQI4 270 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 ZNF556Q9HAH1 456 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 ZNF701Q9NV72 531 aaPredicted RBP4.76□□□□□ -1.65
CHD8-207ENST00000554384 CEP350Q5VT06 3117 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 FAM135AQ9P2D6 1515 aa4.76□□□□□ -1.65
CHD8-207ENST00000554384 FGD6Q6ZV73 1430 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 CLDN4O14493 209 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 GBAP04062 536 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 CSN3P07498 182 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 F7P08709 466 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 CD27P26842 260 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 HOXA1P49639 335 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 CAPZA1P52907 286 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 GSDMDP57764 484 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 LGALS3BPQ08380 585 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 ITPRIPL2Q3MIP1 535 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 ZNF672Q499Z4 452 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 MCMDC2Q4G0Z9 681 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 XKR3Q5GH77 459 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 SMIM29Q86T20 159 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 RFLNBQ8N5W9 214 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 BMPERQ8N8U9 685 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 VANGL1Q8TAA9 524 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 SETD6Q8TBK2 473 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 KCNE4Q8WWG9 221 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 FCAMRQ8WWV6 532 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 HSD17B8Q92506 261 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 PIGBQ92521 554 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 MOB3AQ96BX8 217 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 SPATA33Q96N06 139 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 LRRC3BQ96PB8 259 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 THUMPD3Q9BV44 507 aaKnown RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 CDH20Q9HBT6 801 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 SLC7A7Q9UM01 511 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 WDR83OSQ9Y284 106 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 NME7Q9Y5B8 376 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 MROH2AA6NES4 1674 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 IQGAP1P46940 1657 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 GREB1LQ9C091 1923 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 ARHGAP5Q13017 1502 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 COL16A1Q07092 1604 aaPredicted RBP4.75□□□□□ -1.65
CHD8-207ENST00000554384 EP400Q96L91 3159 aa4.75□□□□□ -1.65
CHD8-207ENST00000554384 KDM5DQ9BY66 1539 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 ANXA2P2A6NMY6 339 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 DNM1LO00429 736 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 PRKNO60260 465 aaPredicted RBP4.74□□□□□ -1.65
CHD8-207ENST00000554384 GSRP00390 522 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 TSHBP01222 138 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 FAM58BPP0C7Q3 252 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 GNAZP19086 355 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 HOXC13P31276 330 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 MNDAP41218 407 aa4.74□□□□□ -1.65
CHD8-207ENST00000554384 ASCL1P50553 236 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms