RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.48
CPSF2-203ENST00000554290 TARM1B6A8C7 271 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 AGPSO00116 658 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 CNOT3O75175 753 aaKnown RBP18.01■□□□□ 0.47
CPSF2-203ENST00000554290 ALBP02768 609 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 GRIA3P42263 894 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 SOX8P57073 446 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 BASP1P80723 227 aaKnown RBP18.01■□□□□ 0.47
CPSF2-203ENST00000554290 GRM7Q14831 915 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 PRR30Q53SZ7 412 aaPredicted RBP18.01■□□□□ 0.47
CPSF2-203ENST00000554290 DRICH1Q6PGQ1 229 aaPredicted RBP18.01■□□□□ 0.47
CPSF2-203ENST00000554290 IGFL3Q6UXB1 125 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 OTOAQ7RTW8 1153 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 OVCH1Q7RTY7 1134 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 PPP1R32Q7Z5V6 425 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 TAX1BP1Q86VP1 789 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 SSC4DQ8WTU2 575 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 MAIP1Q8WWC4 291 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 WDR54Q9H977 334 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 TREX1Q9NSU2 369 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 TTC7AQ9ULT0 858 aaPredicted RBP18.01■□□□□ 0.47
CPSF2-203ENST00000554290 SEC16AO15027 2179 aa18.01■□□□□ 0.47
CPSF2-203ENST00000554290 TCP11X1B4DZS4 312 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 DSCR3O14972 297 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 PFDN6O15212 129 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 UMODP07911 640 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 RPS3P23396 243 aaKnown RBP eCLIP18■□□□□ 0.47
CPSF2-203ENST00000554290 CCNFP41002 786 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 GCGRP47871 477 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 CRADDP78560 199 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 AIMP2Q13155 320 aaKnown RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 FAM214AQ32MH5 1076 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 PLEKHN1Q494U1 663 aaPredicted RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 FCRL6Q6DN72 434 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 SDCCAG8Q86SQ7 713 aaPredicted RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 ZADH2Q8N4Q0 377 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 OTUD6BQ8N6M0 293 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 LMNTD1Q8N9Z9 388 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 TTC29Q8NA56 475 aaPredicted RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 MAGEC3Q8TD91 643 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 FOPNLQ96NB1 174 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 ZNF552Q9H707 407 aaPredicted RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 SLC22A11Q9NSA0 550 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 CUTCQ9NTM9 273 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 CUEDC1Q9NWM3 386 aaPredicted RBP18■□□□□ 0.47
CPSF2-203ENST00000554290 IL1RAPL1Q9NZN1 696 aa18■□□□□ 0.47
CPSF2-203ENST00000554290 USP9YO00507 2555 aaPredicted RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 PRICKLE3O43900 615 aaPredicted RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 SRPX2O60687 465 aaPredicted RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 C1orf105O95561 183 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 ONECUT2O95948 504 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 MMP11P24347 488 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 NMBRP28336 390 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 EIF3BP55884 814 aaKnown RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 CDK16Q00536 496 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 SIX1Q15475 284 aaPredicted RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 C4orf17Q53FE4 359 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 MRNIPQ6NTE8 343 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 VPS50Q96JG6 964 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 ILKAPQ9H0C8 392 aaPredicted RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 ENAMQ9NRM1 1142 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 CDC23Q9UJX2 597 aa17.99■□□□□ 0.47
CPSF2-203ENST00000554290 NXT1Q9UKK6 140 aaKnown RBP17.99■□□□□ 0.47
CPSF2-203ENST00000554290 USP9XQ93008 2570 aaPredicted RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 RELNP78509 3460 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 H3BMM5 538 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 VAPBO95292 243 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 ITGAXP20702 1163 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 FOXL2P58012 376 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 NKG7Q16617 165 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 EIF2S3LQ2VIR3 472 aaKnown RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 RNF187Q5TA31 235 aaPredicted RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 IRAK1BP1Q5VVH5 260 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 PRR7Q8TB68 274 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 HMGCLL1Q8TB92 370 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 SNRNP40Q96DI7 357 aaKnown RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 TCF12Q99081 682 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 KIFC1Q9BW19 673 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 SLC26A1Q9H2B4 701 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 MRM3Q9HC36 420 aaKnown RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 PLEKHB1Q9UF11 243 aaPredicted RBP17.98■□□□□ 0.47
CPSF2-203ENST00000554290 NFS1Q9Y697 457 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 FAM169AQ9Y6X4 670 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 PCSK5Q92824 1860 aa17.98■□□□□ 0.47
CPSF2-203ENST00000554290 FITM1A5D6W6 292 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 SEMA7AO75326 666 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 FGGP02679 453 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 ITGA3P26006 1051 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 MGAT1P26572 445 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 MRPL49Q13405 166 aaKnown RBP17.97■□□□□ 0.47
CPSF2-203ENST00000554290 NAA25Q14CX7 972 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 PRAMEF13Q5VWM6 474 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 CNSTQ6PJW8 725 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 CISD2Q8N5K1 135 aaKnown RBP17.97■□□□□ 0.47
CPSF2-203ENST00000554290 C19orf60Q96EN9 201 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 ZNF285Q96NJ3 590 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 MIPEPQ99797 713 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 HOMER3Q9NSC5 361 aa17.97■□□□□ 0.47
CPSF2-203ENST00000554290 FBXL4Q9UKA2 621 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms