RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TMEM200CA6NKL6 621 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 CRTAMO95727 393 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 F10P00742 488 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 NFKB1P19838 968 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 MAGP20916 626 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 CD68P34810 354 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-220ENST00000551716 EMP2P54851 167 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 XIAPP98170 497 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 ALDH6A1Q02252 535 aaKnown RBP14.59□□□□□ -0.07
CACNB3-220ENST00000551716 ZNF766Q5HY98 468 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 E4F1Q66K89 784 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-220ENST00000551716 DNAAF3Q8N9W5 541 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 C8orf44Q96CB5 159 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 ZNF285Q96NJ3 590 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 SELENOSQ9BQE4 189 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-220ENST00000551716 UVRAGQ9P2Y5 699 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 MKL2Q9ULH7 1088 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 EDARQ9UNE0 448 aa14.59□□□□□ -0.07
CACNB3-220ENST00000551716 IGLV3-16A0A075B6K0 115 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 IGHV1-45A0A0A0MS14 117 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 HYKKA2RU49 373 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 FAM227AF5H4B4 570 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 AP2A2O94973 939 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 FKBP9O95302 570 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 TSPAN12O95859 305 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 ABOP16442 354 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 ACADLP28330 430 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 IST1P53990 364 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 FOLH1Q04609 750 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 PCOLCEQ15113 449 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 ODF2Q5BJF6 829 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 PID1Q7Z2X4 250 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 ZUFSPQ96AP4 578 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 ZNF559Q9BR84 538 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
CACNB3-220ENST00000551716 CTTNBP2NLQ9P2B4 639 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 KLHL8Q9P2G9 620 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-220ENST00000551716 KCNN3Q9UGI6 736 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 CDC14AQ9UNH5 594 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 MAU2Q9Y6X3 613 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 CACNA1CQ13936 2221 aa14.58□□□□□ -0.08
CACNB3-220ENST00000551716 IGLV3-12A0A075B6K2 115 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 TARM1B6A8C7 271 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 QSOX1O00391 747 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 PRRG2O14669 202 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 S1PR4O95977 384 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 IGFBP2P18065 325 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 SRSF11Q05519 484 aaKnown RBP14.57□□□□□ -0.08
CACNB3-220ENST00000551716 ZNF33BQ06732 778 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 WASHC5Q12768 1159 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 FILIP1LQ4L180 1135 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 WASHC2DQ5SRD0 308 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 TMEM200AQ86VY9 491 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 TMTC1Q8IUR5 882 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 PRSS58Q8IYP2 241 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 AGAP11Q8TF27 550 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 OXNAD1Q96HP4 312 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-220ENST00000551716 TMEM121Q9BTD3 319 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 FAM96AQ9H5X1 160 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 ANO10Q9NW15 660 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 TRHDEQ9UKU6 1024 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 ACANP16112 2415 aa14.57□□□□□ -0.08
CACNB3-220ENST00000551716 MAP1AP78559 2803 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-220ENST00000551716 ABCA4P78363 2273 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 IDSB3KWA1 339 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 PRPF4O43172 522 aaKnown RBP eCLIP14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ASNA1O43681 348 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ANXA9O76027 345 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 TPBGLP0DKB5 382 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 MCM3P25205 808 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 GRIA3P42263 894 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 PMP22Q01453 160 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 OLIG2Q13516 323 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 SF1Q15637 639 aaKnown RBP14.56□□□□□ -0.08
CACNB3-220ENST00000551716 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ALKBH5Q6P6C2 394 aaKnown RBP14.56□□□□□ -0.08
CACNB3-220ENST00000551716 FIGLAQ6QHK4 219 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 DOLPP1Q86YN1 238 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 RFX6Q8HWS3 928 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 GHDCQ8N2G8 530 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 METTL27Q8N6F8 245 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ASB5Q8WWX0 329 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 SYN2Q92777 582 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ZNF354BQ96LW1 612 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 DMRTA2Q96SC8 542 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 MESP1Q9BRJ9 268 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 FICDQ9BVA6 458 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 ZNF700Q9H0M5 742 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 PPT2Q9UMR5 302 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 KLHL20Q9Y2M5 609 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 FAM169AQ9Y6X4 670 aa14.56□□□□□ -0.08
CACNB3-220ENST00000551716 LOC102723996A0A087X1L8 192 aa14.55□□□□□ -0.08
CACNB3-220ENST00000551716 C3orf70A6NLC5 250 aaPredicted RBP14.55□□□□□ -0.08
CACNB3-220ENST00000551716 NPIPA5E9PKD4 350 aa14.55□□□□□ -0.08
CACNB3-220ENST00000551716 RASGRF2O14827 1237 aa14.55□□□□□ -0.08
CACNB3-220ENST00000551716 WISP2O76076 250 aa14.55□□□□□ -0.08
CACNB3-220ENST00000551716 AGTP01019 485 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms