RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 IFNB1P01574 187 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 RNF224P0DH78 156 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 PEBP1P30086 187 aaKnown RBP22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 PER3P56645 1201 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 RBBP7Q16576 425 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 ST6GALNAC3Q8NDV1 305 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 MAGEC3Q8TD91 643 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 RAD51AP1Q96B01 352 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 FOPNLQ96NB1 174 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 SLC26A1Q9H2B4 701 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 ETNK1Q9HBU6 452 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 SLC6A20Q9NP91 592 aa22.14■■□□□ 1.13
SMARCD1-209ENST00000550477 RASGRF2O14827 1237 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 GPC4O75487 556 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 SUN1O94901 812 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 CTSBP07858 339 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 TTPAP49638 278 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 NKG7Q16617 165 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 TUBB8Q3ZCM7 444 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 PTRHD1Q6GMV3 140 aaKnown RBP22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 MICALCLQ6ZW33 695 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 CUZD1Q86UP6 607 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 FAM20CQ8IXL6 584 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 C2orf73Q8N5S3 287 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 PPHLN1Q8NEY8 458 aaKnown RBP22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 SKA2Q8WVK7 121 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 LHPPQ9H008 270 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 PACSIN2Q9UNF0 486 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF148Q9UQR1 794 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 KLHL20Q9Y2M5 609 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 FAM169AQ9Y6X4 670 aa22.13■■□□□ 1.13
SMARCD1-209ENST00000550477 PRRC2CQ9Y520 2896 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 PCSK5Q92824 1860 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 PRMT5O14744 637 aaPredicted RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 GRIA3P42263 894 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 CARSP49589 748 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 OCA2Q04671 838 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 NAA25Q14CX7 972 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 CRB2Q5IJ48 1285 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 SEL1L2Q5TEA6 688 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 TAX1BP1Q86VP1 789 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 LINC01555Q8NAE3 123 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 ACRBPQ8NEB7 543 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 BARD1Q99728 777 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 SLC22A11Q9NSA0 550 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 CATSPERZQ9NTU4 200 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 SLC2A6Q9UGQ3 507 aa22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 R3HDM2Q9Y2K5 976 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 REXO2Q9Y3B8 237 aaKnown RBP22.12■■□□□ 1.13
SMARCD1-209ENST00000550477 SLCO2B1O94956 709 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 FTCDO95954 541 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 ACVR1Q04771 509 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 CDC16Q13042 620 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 TLR1Q15399 786 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 B3GNTL1Q67FW5 361 aaPredicted RBP22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 RAD9BQ6WBX8 426 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 PARP9Q8IXQ6 854 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 CNDP1Q96KN2 507 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 ZBTB20Q9HC78 741 aaPredicted RBP22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 GNPTGQ9UJJ9 305 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 NOVA2Q9UNW9 492 aaKnown RBP22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 TCAF1Q9Y4C2 921 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 PCM1Q15154 2024 aa22.11■■□□□ 1.13
SMARCD1-209ENST00000550477 AP3B1O00203 1094 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 SOCS6O14544 535 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 PFDN6O15212 129 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 CLDN1O95832 211 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 AOAHP28039 575 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 CCNFP41002 786 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 TSFMP43897 325 aaKnown RBP22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 GCGRP47871 477 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 FOXL2P58012 376 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 HIF1AQ16665 826 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 FCRL6Q6DN72 434 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 PRMT9Q6P2P2 845 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 IGFL2Q6UWQ7 119 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 OTOAQ7RTW8 1153 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 LRRC6Q86X45 466 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 VRK3Q8IV63 474 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 CCDC89Q8N998 374 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 INPP5DQ92835 1189 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 DOCK10Q96BY6 2186 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 THOC3Q96J01 351 aaKnown RBP22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 IL17FQ96PD4 163 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 SPSB2Q99619 263 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 BAG1Q99933 345 aaPredicted RBP22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 TEX15Q9BXT5 2789 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 SOX17Q9H6I2 414 aaPredicted RBP22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 ZNF304Q9HCX3 659 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 RAB6BQ9NRW1 208 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 HS3ST3B1Q9Y662 390 aa22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 UTP20O75691 2785 aaKnown RBP22.1■■□□□ 1.13
SMARCD1-209ENST00000550477 NUP210LQ5VU65 1888 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 UNC79Q9P2D8 2635 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 FITM1A5D6W6 292 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 IQCF5A8MTL0 148 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 MASP2O00187 686 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 CD3EAPO15446 510 aaKnown RBP22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 NDUFS3O75489 264 aa22.09■■□□□ 1.13
SMARCD1-209ENST00000550477 APRTP07741 180 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms