RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 EBLN1P0CF75 366 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 MYBL2P10244 700 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 PCBP4P57723 403 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 RAB10P61026 200 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 ACY1Q03154 408 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 FASTKQ14296 549 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 KCNAB1Q14722 419 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 SF1Q15637 639 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 UAP1Q16222 522 aaPredicted RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 GSPT2Q8IYD1 628 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 UHMK1Q8TAS1 419 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 ZNF480Q8WV37 535 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 SLC44A1Q8WWI5 657 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 SMPDL3AQ92484 453 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 PMEPA1Q969W9 287 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 CCDC138Q96M89 665 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 CTRCQ99895 268 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 TRIM54Q9BYV2 358 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 APMAPQ9HDC9 416 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 PDE7BQ9NP56 450 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 FOXJ2Q9P0K8 574 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 ACSL6Q9UKU0 697 aa18.68■□□□□ 0.58
DDX54-207ENST00000550016 MDC1Q14676 2089 aaKnown RBP18.68■□□□□ 0.58
DDX54-207ENST00000550016 AHCTF1Q8WYP5 2266 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 A0A1W2PPV9 198 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 PHGDHO43175 533 aaKnown RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 RIPK2O43353 540 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 INHBAP08476 426 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 CD82P27701 267 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 MROH9Q5TGP6 573 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 BPHLQ86WA6 291 aaPredicted RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 SYTL1Q8IYJ3 562 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 ANKRD49Q8WVL7 239 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 TCTN2Q96GX1 697 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 DERL2Q9GZP9 239 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 KLHL25Q9H0H3 589 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 FGF21Q9NSA1 209 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 ZMIZ1Q9ULJ6 1067 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 NOVA2Q9UNW9 492 aaKnown RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 RAXQ9Y2V3 346 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 IKBKGQ9Y6K9 419 aa18.67■□□□□ 0.58
DDX54-207ENST00000550016 ANKRD11Q6UB99 2663 aaPredicted RBP18.67■□□□□ 0.58
DDX54-207ENST00000550016 PABPN1LA6NDY0 278 aaKnown RBP18.66■□□□□ 0.58
DDX54-207ENST00000550016 E7ENX8 843 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 ENO2P09104 434 aaPredicted RBP18.66■□□□□ 0.58
DDX54-207ENST00000550016 CCDC166P0CW27 439 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 FGF5P12034 268 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 CRABP2P29373 138 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 MSH2P43246 934 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 AP1S2P56377 157 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 TAP2Q03519 686 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 TUBB3Q13509 450 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 PHKG1Q16816 387 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 FAM20CQ8IXL6 584 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 C19orf47Q8N9M1 422 aaKnown RBP18.66■□□□□ 0.58
DDX54-207ENST00000550016 ZNF248Q8NDW4 579 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 OR2A1Q8NGT9 310 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 PAFAH2Q99487 392 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 CHRNA10Q9GZZ6 450 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 INTS7Q9NVH2 962 aaKnown RBP18.66■□□□□ 0.58
DDX54-207ENST00000550016 CTNNAL1Q9UBT7 734 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 IKZF3Q9UKT9 509 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 RARRES3Q9UL19 164 aa18.66■□□□□ 0.58
DDX54-207ENST00000550016 HMX2A2RU54 273 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 POC1B-GALNT4F8VUJ3 575 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 CDC7O00311 574 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 MSL3P1P0C860 447 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 PSMB5P28074 263 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 IMPA1P29218 277 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 RPA3P35244 121 aaPredicted RBP18.65■□□□□ 0.58
DDX54-207ENST00000550016 EIF2S3P41091 472 aaKnown RBP18.65■□□□□ 0.58
DDX54-207ENST00000550016 SERPINB9P50453 376 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 TSTA3Q13630 321 aaPredicted RBP18.65■□□□□ 0.58
DDX54-207ENST00000550016 GPR19Q15760 415 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 ZIC1Q15915 447 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 KIAA1614Q5VZ46 1190 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 FIGLAQ6QHK4 219 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 SUSD1Q6UWL2 747 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 SBSNQ6UWP8 590 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 RAPH1Q70E73 1250 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 PPP1R3BQ86XI6 285 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 PPFIBP2Q8ND30 876 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 OR2L3Q8NG85 312 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 OR8K5Q8NH50 307 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 UBXN10Q96LJ8 280 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 MIPEPQ99797 713 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 ARL15Q9NXU5 204 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 STOX2Q9P2F5 926 aaPredicted RBP18.65■□□□□ 0.58
DDX54-207ENST00000550016 DMXL2Q8TDJ6 3036 aa18.65■□□□□ 0.58
DDX54-207ENST00000550016 EXOC1LA0A1B0GW35 172 aa18.64■□□□□ 0.57
DDX54-207ENST00000550016 NPEPPSL1A6NEC2 478 aa18.64■□□□□ 0.57
DDX54-207ENST00000550016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.64■□□□□ 0.57
DDX54-207ENST00000550016 MAGP20916 626 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms