RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 MED16Q9Y2X0 877 aa15.29■□□□□ 0.04
COX6A1-203ENST00000550009 PTRH2Q9Y3E5 179 aaKnown RBP15.29■□□□□ 0.04
COX6A1-203ENST00000550009 CNTRLQ7Z7A1 2325 aa15.29■□□□□ 0.04
COX6A1-203ENST00000550009 CEACAM4O75871 244 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 COILP38432 576 aaPredicted RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 PLOD1Q02809 727 aaPredicted RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 CUL1Q13616 776 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 UNC5DQ6UXZ4 953 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 SHISA6Q6ZSJ9 500 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 COX15Q7KZN9 410 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 ZNF669Q96BR6 464 aaPredicted RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 KCNF1Q9H3M0 494 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 MRM3Q9HC36 420 aaKnown RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 FBXO6Q9NRD1 293 aaPredicted RBP15.28■□□□□ 0.04
COX6A1-203ENST00000550009 IRAK4Q9NWZ3 460 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 PLCL2Q9UPR0 1127 aa15.28■□□□□ 0.04
COX6A1-203ENST00000550009 ICE1Q9Y2F5 2266 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 LOC105369274A0A096LPK9 316 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ARHGEF33A8MVX0 844 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ALAS2P22557 587 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 MAGEA6P43360 314 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 OR1D4P47884 311 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 PGDP52209 483 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 CTBP1Q13363 440 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 SF1Q15637 639 aaKnown RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 NKAIN1Q4KMZ8 207 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ANKRD20A4Q4UJ75 823 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 CASC4Q6P4E1 433 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 SUSD1Q6UWL2 747 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 TTLL10Q6ZVT0 673 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 OTOAQ7RTW8 1153 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 PPP1R32Q7Z5V6 425 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 MRGPREQ86SM8 312 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 OR4N4Q8N0Y3 316 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 RBMXL3Q8N7X1 1067 aaKnown RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 Q8NA96 180 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 PPFIBP2Q8ND30 876 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 SERPINB12Q96P63 405 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ACAT2Q9BWD1 397 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ZBTB20Q9HC78 741 aaPredicted RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 SLC6A20Q9NP91 592 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 IFT80Q9P2H3 777 aaPredicted RBP15.27■□□□□ 0.04
COX6A1-203ENST00000550009 SLC39A10Q9ULF5 831 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 MAU2Q9Y6X3 613 aa15.27■□□□□ 0.04
COX6A1-203ENST00000550009 ZCWPW2A0A1B0GU75 182 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 C9J4A7 227 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 MATN4O95460 622 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 S1PR4O95977 384 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 AGXTP21549 392 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 PGGT1BP53609 377 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 DCDP81605 110 aaKnown RBP15.26■□□□□ 0.03
COX6A1-203ENST00000550009 MPP1Q00013 466 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 TMED2Q15363 201 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 KLHL38Q2WGJ6 581 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 KIAA0930Q6ICG6 404 aaPredicted RBP15.26■□□□□ 0.03
COX6A1-203ENST00000550009 MRPL14Q6P1L8 145 aaKnown RBP15.26■□□□□ 0.03
COX6A1-203ENST00000550009 CILP2Q8IUL8 1156 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 OR2A1Q8NGT9 310 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 TSSK1BQ9BXA7 367 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
COX6A1-203ENST00000550009 SLC17A6Q9P2U8 582 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 CTSFQ9UBX1 484 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 NDOR1Q9UHB4 597 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 RP1L1Q8IWN7 2480 aaPredicted RBP15.26■□□□□ 0.03
COX6A1-203ENST00000550009 HIVEP3Q5T1R4 2406 aa15.26■□□□□ 0.03
COX6A1-203ENST00000550009 IGKV1-8A0A0C4DH67 115 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 A0A0J9YVX5 310 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 FFAR3O14843 346 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 GPR42O15529 346 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 MAP3K7O43318 606 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 KIF5CO60282 957 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 STATHP02808 62 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 PPARGP37231 505 aaPredicted RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 CLCN7P51798 805 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 VSX2P58304 361 aaPredicted RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 DHX34Q14147 1143 aaKnown RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 CYP1B1Q16678 543 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 PAPD7Q5XG87 772 aaKnown RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 ZNF470Q6ECI4 717 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 NEPROQ6NW34 567 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 CCDC137Q6PK04 289 aaKnown RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 C4orf22Q6V702 233 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 OR2L3Q8NG85 312 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 PWWP2AQ96N64 755 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 PANX3Q96QZ0 392 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 SOX17Q9H6I2 414 aaPredicted RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 PCDHGA9Q9Y5G4 932 aaKnown RBP15.25■□□□□ 0.03
COX6A1-203ENST00000550009 CSAG2Q9Y5P2 127 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 AP1M2Q9Y6Q5 423 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 ZGRF1Q86YA3 2104 aa15.25■□□□□ 0.03
COX6A1-203ENST00000550009 LRRK2Q5S007 2527 aa15.24■□□□□ 0.03
COX6A1-203ENST00000550009 SVILO95425 2214 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms