RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 AMIGO1Q86WK6 493 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 WDR75Q8IWA0 830 aaKnown RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 SNX31Q8N9S9 440 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 LCN9Q8WX39 176 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 SLC22A18Q96BI1 424 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 NSUN5Q96P11 429 aaKnown RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 LRFN3Q9BTN0 628 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 NTMT1Q9BV86 223 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 TRIM55Q9BYV6 548 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 C20orf27Q9GZN8 174 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 GAREM1Q9H706 876 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 NOL11Q9H8H0 719 aaKnown RBP16.85■□□□□ 0.29
LETMD1-220ENST00000549686 ZBTB26Q9HCK0 441 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 NLGN3Q9NZ94 848 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 VTI1BQ9UEU0 232 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 PLAGL1Q9UM63 463 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 ICKQ9UPZ9 632 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 SLC22A14Q9Y267 594 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 DYRK1BQ9Y463 629 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 ASB1Q9Y576 335 aa16.85■□□□□ 0.29
LETMD1-220ENST00000549686 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
LETMD1-220ENST00000549686 CLGNO14967 610 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 ENO1P06733 434 aaKnown RBP16.84■□□□□ 0.29
LETMD1-220ENST00000549686 RETP07949 1114 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 EBLN1P0CF75 366 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 GNAZP19086 355 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 ARRB2P32121 409 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 BIRC2Q13490 618 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 PLCL1Q15111 1095 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 LPAL2Q16609 132 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 DEFB133Q30KQ1 61 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 C14orf28Q4W4Y0 310 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.84■□□□□ 0.29
LETMD1-220ENST00000549686 TMEM26Q6ZUK4 368 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 CLYBLQ8N0X4 340 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 ARL10Q8N8L6 244 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 SAP25Q8TEE9 199 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 PYCR2Q96C36 320 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 IL17FQ96PD4 163 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 CCT8L2Q96SF2 557 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 ARRDC1-AS1Q9H2J1 176 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 SRMSQ9H3Y6 488 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 PFDN4Q9NQP4 134 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 INTS7Q9NVH2 962 aaKnown RBP16.84■□□□□ 0.29
LETMD1-220ENST00000549686 UCKL1Q9NWZ5 548 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 CIDEBQ9UHD4 219 aa16.84■□□□□ 0.29
LETMD1-220ENST00000549686 TRBV23OR9-2A0A075B6M9 112 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 KRT87PA6NCN2 255 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 PCDHGA12O60330 932 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 NOBOXO60393 691 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 CRCPO75575 148 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 CCNDBP1O95273 360 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 FKBP9O95302 570 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 SH3BP2P78314 561 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ABATP80404 500 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 GPR18Q14330 331 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 TBCCQ15814 346 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 CACNA1EQ15878 2313 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 GGTA1PQ4G0N0 100 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 PLA2G2CQ5R387 149 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 SH2D4BQ5SQS7 431 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 THEMIS2Q5TEJ8 643 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 PRAMEF13Q5VWM6 474 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 KLHL35Q6PF15 583 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 KANSL1Q7Z3B3 1105 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 MILR1Q7Z6M3 343 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 SLC25A45Q8N413 288 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ARL14Q8N4G2 192 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF781Q8N8C0 355 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 PATE1Q8WXA2 126 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 MOCOSQ96EN8 888 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 KCNH6Q9H252 994 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 EHD1Q9H4M9 534 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ZNF395Q9H8N7 513 aaPredicted RBP16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 TRPS1Q9UHF7 1281 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 TRAF6Q9Y4K3 522 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 PCDHB11Q9Y5F2 797 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 ENTPD2Q9Y5L3 495 aa16.83■□□□□ 0.28
LETMD1-220ENST00000549686 LILRA5A6NI73 299 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 PATE3B3GLJ2 98 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 UBFD1O14562 309 aaKnown RBP16.82■□□□□ 0.28
LETMD1-220ENST00000549686 OR7A17O14581 309 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 AZIN1O14977 448 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 CLDN9O95484 217 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 CHEK2O96017 543 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 MPSTP25325 297 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
LETMD1-220ENST00000549686 CCR10P46092 362 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 ATXN3P54252 364 aaPredicted RBP16.82■□□□□ 0.28
LETMD1-220ENST00000549686 GABPB1Q06547 395 aaPredicted RBP16.82■□□□□ 0.28
LETMD1-220ENST00000549686 BNIP3Q12983 259 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 TRAF3Q13114 568 aa16.82■□□□□ 0.28
LETMD1-220ENST00000549686 FASTKQ14296 549 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms