RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 C12orf66Q96MD2 445 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 TSPAN18Q96SJ8 248 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 SALL4Q9UJQ4 1053 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 PTPRUQ92729 1446 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 J3QLW9 94 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ZNF19P17023 458 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ZNF3P17036 446 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 PTX3P26022 381 aaPredicted RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 HSD11B1P28845 292 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 CHRNA4P43681 627 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 RPA4Q13156 261 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 TRMT10BQ6PF06 316 aaKnown RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 THAP6Q8TBB0 222 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 DEC1Q9P2X7 70 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 CYTH4Q9UIA0 394 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 MATN3O15232 486 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 FNTBP49356 437 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 TUBA4AP68366 448 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 NFKB2Q00653 900 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 BANPQ8N9N5 519 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 PCDH19Q8TAB3 1148 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 DQX1Q8TE96 717 aaKnown RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 SRMSQ9H3Y6 488 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 SMURF1Q9HCE7 757 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 MKKSQ9NPJ1 570 aaPredicted RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 AXIN1O15169 862 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 MCCD1P59942 119 aaPredicted RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 EIPR1Q53HC9 387 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 YIPF7Q8N8F6 280 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 S100PBPQ96BU1 408 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 DPAGT1Q9H3H5 408 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 LGALS13Q9UHV8 139 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 OR51F1A6NGY5 319 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 HOXC6P09630 235 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ZNF16P17020 682 aaPredicted RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 PTNP21246 168 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 CLCNKBP51801 687 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 PLEKHG6Q3KR16 790 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 GALNT6Q8NCL4 622 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 PKP4Q99569 1192 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 SLC25A51Q9H1U9 297 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ZNF358Q9NW07 568 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 GSKIPQ9P0R6 139 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 HMGXB4Q9UGU5 601 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 FZD4Q9ULV1 537 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ERVK-11Q9UQG0 969 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 RHPN2P1A8MT19 583 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 E7EQ34 232 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 SSX5O60225 188 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 PCDH7O60245 1069 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 GABBR2O75899 941 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 CDRT1O95170 752 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 CDH1P12830 882 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 PTGIRP43119 386 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 EIF5AP63241 154 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 DAG1Q14118 895 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TM9SF2Q99805 663 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 HSD17B14Q9BPX1 270 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 SLC35A5Q9BS91 424 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 FUZQ9BT04 418 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ITPAQ9BY32 194 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TTTY10Q9BZA0 68 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 MCCC2Q9HCC0 563 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 MRPS30Q9NP92 439 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 ADAP2Q9NPF8 381 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 NOP16Q9Y3C1 178 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 FAM234BA2RU67 622 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TLX3O43711 291 aaPredicted RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 CCKBRP32239 447 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 RBM20Q5T481 1227 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 CERS6Q6ZMG9 384 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ERI1Q8IV48 349 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 LGI4Q8N135 537 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TMBIM1Q969X1 311 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ELOVL2Q9NXB9 296 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 RDH8Q9NYR8 311 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 DLC1Q96QB1 1528 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 SMIM28A0A1B0GU29 152 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 A0A1W2PRB8 838 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 ISPDA4D126 451 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 FESP07332 822 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 PUS10Q3MIT2 529 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TAC4Q86UU9 113 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TMEM17Q86X19 198 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 JAGN1Q8N5M9 183 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 OR8S1Q8NH09 359 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 AKAP1Q92667 903 aaKnown RBP eCLIP15.13■□□□□ 0.014e-9■■□□□ 11.7
CHD4-210ENST00000544040 LIN28AQ9H9Z2 209 aaKnown RBP15.13■□□□□ 0.01
CHD4-210ENST00000544040 GTF2IRD1Q9UHL9 959 aa15.13■□□□□ 0.01
CHD4-210ENST00000544040 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 A0A1B0GVT2 93 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 TRIM64CA6NLI5 447 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 IFNA21P01568 189 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 CRISP3P54108 245 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 AP1S1P61966 158 aa15.12■□□□□ 0.01
CHD4-210ENST00000544040 SLC10A7Q0GE19 358 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms