RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SLC22A18Q96BI1 424 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MED8Q96G25 268 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GPR78Q96P69 363 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RAB33BQ9H082 229 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ATG10Q9H0Y0 220 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 DCDC2Q9UHG0 476 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MN1Q10571 1320 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 COL27A1Q8IZC6 1860 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 IGHV5-10-1A0A0J9YXX1 117 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SYCE1LA8MT33 242 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CSO75390 466 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MYZAPP0CAP1 466 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 UGT2B7P16662 529 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CDH3P22223 829 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 OAS2P29728 719 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RPA3P35244 121 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCT5P48643 541 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 INHBCP55103 352 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CDKL1Q00532 357 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SF1Q15637 639 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TECRLQ5HYJ1 363 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 THEMIS2Q5TEJ8 643 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CACHD1Q5VU97 1274 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CDCP2Q5VXM1 449 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SPESP1Q6UW49 350 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TRABD2AQ86V40 505 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 LCA5Q86VQ0 697 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 C4orf33Q8N1A6 199 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RCBTB1Q8NDN9 531 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FBXL8Q96CD0 374 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCDC74BQ96LY2 380 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 OR2A14Q96R47 310 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ATOH8Q96SQ7 321 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CD180Q99467 661 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCDC177Q9NQR7 707 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 POMT2Q9UKY4 750 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PTPRBP23467 1997 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCDC189A1A4V9 331 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 E7ENX8 843 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 UBXN8O00124 270 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 AGRPO00253 132 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 COPEO14579 308 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KIF1CO43896 1103 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GLRA3O75311 464 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GSTA1P08263 222 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 THRAP10827 490 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PSMB5P28074 263 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PEBP1P30086 187 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KCNC1P48547 511 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HNMTP50135 292 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TBPL1P62380 186 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TAP2Q03519 686 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FOXC1Q12948 553 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 NAE1Q13564 534 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ISXQ2M1V0 245 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 B3GNT8Q7Z7M8 397 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SMC6Q96SB8 1091 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MAP3K3Q99759 626 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MRPL57Q9BQC6 102 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 STRADBQ9C0K7 418 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 IQCGQ9H095 443 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 NUDT4Q9NZJ9 180 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMEM216Q9P0N5 145 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 XPR1Q9UBH6 696 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PCDHB11Q9Y5F2 797 aa13.99□□□□□ -0.17
TNFRSF1A-216ENST00000543995 A0A1W2PPV9 198 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FAM149AA5PLN7 773 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TLCD2A6NGC4 264 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMX2-CTNND1H3BSU7 103 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GFAPP14136 432 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CCND1P24385 295 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SEPHS1P49903 392 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PDX1P52945 283 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZFP36L1Q07352 338 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TRA2AQ13595 282 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SLC5A12Q1EHB4 618 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SULT1C3Q6IMI6 304 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CAPN13Q6MZZ7 669 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SH2D5Q6ZV89 423 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TRIM73Q86UV7 250 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 LRRC56Q8IYG6 542 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TCAIMQ8N3R3 496 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 DCBLD1Q8N8Z6 715 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PYCR2Q96C36 320 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RHBDF1Q96CC6 855 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PPM1MQ96MI6 270 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MIPEPQ99797 713 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ACAT2Q9BWD1 397 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TAC3Q9UHF0 121 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GRID1Q9ULK0 1009 aa13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CNOT1A5YKK6 2376 aaKnown RBP13.98□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SPEGQ15772 3267 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms