RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LOXL2Q9Y4K0 774 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 OARD1Q9Y530 152 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 PCDHB11Q9Y5F2 797 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ARID1BQ8NFD5 2236 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 MN1Q10571 1320 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 IGHV5-51A0A0C4DH38 117 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 A0A0J9YY10 115 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 HMX2A2RU54 273 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SLC9B1P1A6NJY1 282 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 COPEO14579 308 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 HGSO14964 777 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 TOX3O15405 576 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 RGS16O15492 202 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 CCNT2O60583 730 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 SMIM24O75264 130 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 DKK1O94907 266 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 WDR47O94967 919 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZBTB11O95625 1053 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 C9P02748 559 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 RBP1P09455 135 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TPBGLP0DKB5 382 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PYGBP11216 843 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 COL6A2P12110 1019 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 GFAPP14136 432 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CCND1P24385 295 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PSMB5P28074 263 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 IMPA1P29218 277 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CCKBRP32239 447 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TBPL1P62380 186 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 GABREP78334 506 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CFHR1Q03591 330 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZFP36L1Q07352 338 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 DLG1Q12959 904 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 EIF3IQ13347 325 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 NAE1Q13564 534 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 FASTKQ14296 549 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 GRB7Q14451 532 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 NAA25Q14CX7 972 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 C16orf72Q14CZ0 275 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TGFBIQ15582 683 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 OR4D1Q15615 310 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SLC5A12Q1EHB4 618 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CEP85LQ5SZL2 805 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TMEM164Q5U3C3 297 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PRAMEF13Q5VWM6 474 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CAPN13Q6MZZ7 669 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 CYB5D1Q6P9G0 228 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 ERMP1Q7Z2K6 904 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TMPRSS9Q7Z410 1059 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PRSS42Q7Z5A4 293 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TRIM73Q86UV7 250 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TDRPQ86YL5 185 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SLITRK4Q8IW52 837 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 FAM20CQ8IXL6 584 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TCAIMQ8N3R3 496 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 DCBLD1Q8N8Z6 715 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 LINC01555Q8NAE3 123 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 DENND1AQ8TEH3 1009 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 DLG3Q92796 817 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 KIAA1191Q96A73 305 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 FBXL8Q96CD0 374 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 LIN37Q96GY3 246 aaPredicted RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 UBXN10Q96LJ8 280 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZIM3Q96PE6 472 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 OR2A14Q96R47 310 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SLC7A5P2Q9GIP4 190 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ZNF768Q9H5H4 540 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 CNOT10Q9H9A5 744 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 FANCEQ9HB96 536 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PDE7BQ9NP56 450 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 MRPS30Q9NP92 439 aaKnown RBP6.1□□□□□ -1.43
LTBR-212ENST00000543542 C1GALT1Q9NS00 363 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SLC39A1Q9NY26 324 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 NUDT4Q9NZJ9 180 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 EPHA6Q9UF33 1036 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 TAC3Q9UHF0 121 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 IKZF3Q9UKT9 509 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ANGPTL2Q9UKU9 493 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 POMT2Q9UKY4 750 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 SATB2Q9UPW6 733 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 NEUROG3Q9Y4Z2 214 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 ANGPTL3Q9Y5C1 460 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 RP1P56715 2156 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PCNX2A6NKB5 2137 aa6.1□□□□□ -1.43
LTBR-212ENST00000543542 PTPRZ1P23471 2315 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 UQCRHLA0A096LP55 91 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 A0A1W2PPM1 405 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 MED19A0JLT2 244 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 E7ENX8 843 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 UBXN8O00124 270 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 PLD2O14939 933 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 CLGNO14967 610 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 POLR1CO15160 346 aaPredicted RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
LTBR-212ENST00000543542 KERAO60938 352 aa6.09□□□□□ -1.43
LTBR-212ENST00000543542 GLRA3O75311 464 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms