RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ABHD2P08910 425 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 EBLN1P0CF75 366 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 FOLR1P15328 257 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 PNLIPRP1P54315 467 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 NAA25Q14CX7 972 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.74■□□□□ 0.43
COPS7A-216ENST00000543170 FBXO38Q6PIJ6 1188 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 TMEM207Q6UWW9 146 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 TRMT10CQ7L0Y3 403 aaKnown RBP17.74■□□□□ 0.43
COPS7A-216ENST00000543170 PPP1R3BQ86XI6 285 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 CEP97Q8IW35 865 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 MCOLN3Q8TDD5 553 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 KCNE4Q8WWG9 221 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.74■□□□□ 0.43
COPS7A-216ENST00000543170 SMPDL3AQ92484 453 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 DLG3Q92796 817 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 TCTN2Q96GX1 697 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 FANCEQ9HB96 536 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 GPAMQ9HCL2 828 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 FGF21Q9NSA1 209 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 ADAMTS6Q9UKP5 1117 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 RARRES3Q9UL19 164 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 NOVA2Q9UNW9 492 aaKnown RBP17.74■□□□□ 0.43
COPS7A-216ENST00000543170 PDE10AQ9Y233 779 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 TMEM184BQ9Y519 407 aaPredicted RBP17.74■□□□□ 0.43
COPS7A-216ENST00000543170 KLK4Q9Y5K2 254 aa17.74■□□□□ 0.43
COPS7A-216ENST00000543170 PVRP15151 417 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 STMN1P16949 149 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 SAT1P21673 171 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 IMPA1P29218 277 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 AP1S2P56377 157 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 ZNF460Q14592 562 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 USP10Q14694 798 aaKnown RBP17.73■□□□□ 0.43
COPS7A-216ENST00000543170 KCNAB1Q14722 419 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 UBAP2Q5T6F2 1119 aaKnown RBP17.73■□□□□ 0.43
COPS7A-216ENST00000543170 TRIM73Q86UV7 250 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 TAX1BP1Q86VP1 789 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 DTX1Q86Y01 620 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 LMNTD1Q8N9Z9 388 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 ZNF480Q8WV37 535 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 ZNF501Q96CX3 271 aaPredicted RBP17.73■□□□□ 0.43
COPS7A-216ENST00000543170 CCDC138Q96M89 665 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 CTRCQ99895 268 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 TXLNGYQ9BZA5 131 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 SPRY4Q9C004 299 aa17.73■□□□□ 0.43
COPS7A-216ENST00000543170 INTS7Q9NVH2 962 aaKnown RBP17.73■□□□□ 0.43
COPS7A-216ENST00000543170 PCM1Q15154 2024 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 A0A087WUV0 522 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-216ENST00000543170 E7ENX8 843 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 SYF2O95926 243 aaKnown RBP17.72■□□□□ 0.43
COPS7A-216ENST00000543170 HIST1H2AGP0C0S8 130 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-216ENST00000543170 HIST1H2ADP20671 130 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 PGGT1BP53609 377 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 RAB10P61026 200 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 TAP2Q03519 686 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 MAP7Q14244 749 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 FASTKQ14296 549 aaKnown RBP17.72■□□□□ 0.43
COPS7A-216ENST00000543170 PHKG1Q16816 387 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 LRRC69Q6ZNQ3 347 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 CCDC91Q7Z6B0 441 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 C2orf73Q8N5S3 287 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-216ENST00000543170 OR2L3Q8NG85 312 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 OR2A1Q8NGT9 310 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 SLC44A1Q8WWI5 657 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 HIST1H2AHQ96KK5 128 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 HIST1H2AJQ99878 128 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 H2AFJQ9BTM1 129 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 DERL2Q9GZP9 239 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 CAB39LQ9H9S4 337 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 SSUH2Q9Y2M2 353 aa17.72■□□□□ 0.43
COPS7A-216ENST00000543170 ANKRD12Q6UB98 2062 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 PABPN1LA6NDY0 278 aaKnown RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 TARM1B6A8C7 271 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 FAM155BO75949 473 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 CCNDBP1O95273 360 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 SLU7O95391 586 aaKnown RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 DLGAP3O95886 979 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 MAGP20916 626 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 CLN3Q13286 438 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 SF1Q15637 639 aaKnown RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ZIC1Q15915 447 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 PPP1R3AQ16821 1122 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 SBSNQ6UWP8 590 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 CDHR3Q6ZTQ4 885 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ADAMTSL2Q86TH1 951 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 SPACA3Q8IXA5 215 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 LRRC56Q8IYG6 542 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 SYTL1Q8IYJ3 562 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ANKRD49Q8WVL7 239 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ZUFSPQ96AP4 578 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 TRIM54Q9BYV2 358 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 STOX2Q9P2F5 926 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ANKMY1Q9P2S6 941 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 PILRAQ9UKJ1 303 aa17.71■□□□□ 0.43
COPS7A-216ENST00000543170 ZFHX4Q86UP3 3567 aa17.7■□□□□ 0.42
COPS7A-216ENST00000543170 RIPK2O43353 540 aa17.7■□□□□ 0.42
COPS7A-216ENST00000543170 STK17BO94768 372 aa17.7■□□□□ 0.42
COPS7A-216ENST00000543170 CCND1P24385 295 aa17.7■□□□□ 0.42
COPS7A-216ENST00000543170 PSMB5P28074 263 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms