RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PMS2P54278 862 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 GBX1Q14549 363 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 TMED2Q15363 201 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 UAP1Q16222 522 aaPredicted RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 ACSBG2Q5FVE4 666 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 PRAMEF17Q5VTA0 474 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 CTAGE3PQ8IX95 158 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 SLC22A15Q8IZD6 547 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 GPATCH11Q8N954 259 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 EIF1ADQ8N9N8 165 aaKnown RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 OR5K2Q8NHB8 316 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 CD200R1Q8TD46 325 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 SKA2Q8WVK7 121 aaPredicted RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 STARD8Q92502 1023 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 ZNF501Q96CX3 271 aaPredicted RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 FCRL4Q96PJ5 515 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 TSPYL1Q9H0U9 437 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 ACSS3Q9H6R3 686 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 AKIRIN1Q9H9L7 192 aaPredicted RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 FANCEQ9HB96 536 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 SPHK1Q9NYA1 384 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 MTO1Q9Y2Z2 717 aaKnown RBP13.75□□□□□ -0.21
LTBR-209ENST00000541102 SPTBP11277 2137 aa13.75□□□□□ -0.21
LTBR-209ENST00000541102 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 HMX2A2RU54 273 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 ISM1B1AKI9 464 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 PFDN6O15212 129 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 RIPK2O43353 540 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 SLCO2B1O94956 709 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 CHRM5P08912 532 aaPredicted RBP13.74□□□□□ -0.21
LTBR-209ENST00000541102 UGT2B7P16662 529 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 STX2P32856 288 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 MC1RQ01726 317 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 DNASE1L3Q13609 305 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 ZNF460Q14592 562 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 SLMAPQ14BN4 828 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 ATP1A1-AS1Q5TC04 95 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 HECTD2Q5U5R9 776 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 FAM199XQ6PEV8 388 aaPredicted RBP13.74□□□□□ -0.21
LTBR-209ENST00000541102 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 SPESP1Q6UW49 350 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 TMEM207Q6UWW9 146 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 ZNF605Q86T29 641 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 CEP97Q8IW35 865 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 C2orf73Q8N5S3 287 aaPredicted RBP13.74□□□□□ -0.21
LTBR-209ENST00000541102 ZBTB2Q8N680 514 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 OR8K5Q8NH50 307 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 AENQ8WTP8 325 aaKnown RBP13.74□□□□□ -0.21
LTBR-209ENST00000541102 CT55Q8WUE5 264 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 MR1Q95460 341 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 VPS39Q96JC1 886 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 PANX3Q96QZ0 392 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 PITPNM3Q9BZ71 974 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 CAB39LQ9H9S4 337 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 LATS2Q9NRM7 1088 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 NFS1Q9Y697 457 aa13.74□□□□□ -0.21
LTBR-209ENST00000541102 FAM95CA0A1B0GW59 222 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 E5RI56 91 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 KDM1AO60341 852 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 FDXRP22570 491 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 MCM3P25205 808 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 GCAP28676 217 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
LTBR-209ENST00000541102 CCR10P46092 362 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 TAS2R39P59534 338 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 CDC20Q12834 499 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 ERV3-1Q14264 604 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 SLC29A2Q14542 456 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 PAQR3Q6TCH7 311 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 CEP128Q6ZU80 1094 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 TRMT10CQ7L0Y3 403 aaKnown RBP13.73□□□□□ -0.21
LTBR-209ENST00000541102 OTOAQ7RTW8 1153 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 KCNJ9Q92806 393 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 CLIP3Q96DZ5 547 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 CATSPER2Q96P56 530 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 IL17FQ96PD4 163 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 OR2A14Q96R47 310 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 RBBP8Q99708 897 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 CPNE1Q99829 537 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 RHOJQ9H4E5 214 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 OR6C2Q9NZP2 312 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 SERTAD3Q9UJW9 196 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 KCND3Q9UK17 655 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 VWA7Q9Y334 891 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 DHRS7Q9Y394 339 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 PCDHB3Q9Y5E6 796 aa13.73□□□□□ -0.21
LTBR-209ENST00000541102 SMG1Q96Q15 3661 aaKnown RBP13.73□□□□□ -0.21
LTBR-209ENST00000541102 ZNF462Q96JM2 2506 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 BAHCC1Q9P281 2608 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms