RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HPP00738 406 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 RPN2P04844 631 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 PTPN7P35236 360 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 BRD3Q15059 726 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 DARS2Q6PI48 645 aaKnown RBP25.67■■□□□ 1.7
CHFR-218ENST00000540963 KRT35Q92764 455 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 MENTQ9BUN1 341 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 PLAGL1Q9UM63 463 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 TFR2Q9UP52 801 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 POLQO75417 2590 aa25.67■■□□□ 1.7
CHFR-218ENST00000540963 AKR1B15C9JRZ8 316 aaPredicted RBP25.66■■□□□ 1.7
CHFR-218ENST00000540963 PJA2O43164 708 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 CD9P21926 228 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 CTNNA2P26232 953 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 Q0VFX4 171 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 SPARCL1Q14515 664 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 TTC29Q8NA56 475 aaPredicted RBP25.66■■□□□ 1.7
CHFR-218ENST00000540963 LINC01555Q8NAE3 123 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 ALS2CR12Q96Q35 445 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 SOX17Q9H6I2 414 aaPredicted RBP25.66■■□□□ 1.7
CHFR-218ENST00000540963 CTSFQ9UBX1 484 aa25.66■■□□□ 1.7
CHFR-218ENST00000540963 MROH6A6NGR9 719 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 SRPX2O60687 465 aaPredicted RBP25.65■■□□□ 1.7
CHFR-218ENST00000540963 USP1O94782 785 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 FDXRP22570 491 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 MSNP26038 577 aaKnown RBP25.65■■□□□ 1.7
CHFR-218ENST00000540963 TDGF1P3P51864 188 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 PARP6Q2NL67 630 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 LINC00696Q6ZRV3 163 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 SLC22A15Q8IZD6 547 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 OR1N1Q8NGS0 311 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 NR4A3Q92570 626 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 ZUFSPQ96AP4 578 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 LRRC40Q9H9A6 602 aa25.65■■□□□ 1.7
CHFR-218ENST00000540963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.65■■□□□ 1.7
CHFR-218ENST00000540963 MACROD2A1Z1Q3 448 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 DYTNA2CJ06 578 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 TARM1B6A8C7 271 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 KLHL18O94889 574 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 GRNP28799 593 aaKnown RBP25.64■■□□□ 1.7
CHFR-218ENST00000540963 ZXDCQ2QGD7 858 aaPredicted RBP25.64■■□□□ 1.7
CHFR-218ENST00000540963 MTFR2Q6P444 385 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 FIGLAQ6QHK4 219 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 NLRP9Q7RTR0 991 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 GDF7Q7Z4P5 450 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 FAM20CQ8IXL6 584 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 CATSPER1Q8NEC5 780 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 OR2L8Q8NGY9 312 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.64■■□□□ 1.7
CHFR-218ENST00000540963 TTC1Q99614 292 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 CRB3Q9BUF7 120 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 OSBPL8Q9BZF1 889 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 CHST11Q9NPF2 352 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 SUCOQ9UBS9 1254 aaKnown RBP25.64■■□□□ 1.7
CHFR-218ENST00000540963 KLHL20Q9Y2M5 609 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 F8P00451 2351 aa25.64■■□□□ 1.7
CHFR-218ENST00000540963 TRAV17A0A0B4J275 112 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 ACPPP15309 386 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 FOXN2P32314 431 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 CTNNA1P35221 906 aaKnown RBP25.63■■□□□ 1.69
CHFR-218ENST00000540963 MAGEA1P43355 309 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 ARG2P78540 354 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 POU6F1Q14863 301 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.63■■□□□ 1.69
CHFR-218ENST00000540963 PRMT9Q6P2P2 845 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 SHISA6Q6ZSJ9 500 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 CNGA4Q8IV77 575 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 DCUN1D3Q8IWE4 304 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 KBTBD2Q8IY47 623 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 ITLN2Q8WWU7 325 aaPredicted RBP25.63■■□□□ 1.69
CHFR-218ENST00000540963 SELENOSQ9BQE4 189 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 PCDHA3Q9Y5H8 950 aa25.63■■□□□ 1.69
CHFR-218ENST00000540963 MAP2K7O14733 419 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 TPH1P17752 444 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 TNFSF10P50591 281 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 OCA2Q04671 838 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 ATG9BQ674R7 924 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 UNC5DQ6UXZ4 953 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 MICALCLQ6ZW33 695 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 HAS2Q92819 552 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 TSSK1BQ9BXA7 367 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 RAB11FIP5Q9BXF6 653 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 ZNF282Q9UDV7 671 aaPredicted RBP25.62■■□□□ 1.69
CHFR-218ENST00000540963 KLK4Q9Y5K2 254 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 ADGRG4Q8IZF6 3080 aa25.62■■□□□ 1.69
CHFR-218ENST00000540963 CSMD2Q7Z408 3487 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 A0A1W2PQ72 361 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 PSMD3O43242 534 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 TJP3O95049 919 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 MCM3P25205 808 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 SOX11P35716 441 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 OR1D4P47884 311 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 KLC1Q07866 573 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 SF1Q15637 639 aaKnown RBP25.61■■□□□ 1.69
CHFR-218ENST00000540963 NAPRTQ6XQN6 538 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 BNC2Q6ZN30 1099 aaPredicted RBP25.61■■□□□ 1.69
CHFR-218ENST00000540963 ARHGEF18Q6ZSZ5 1173 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 ZNF808Q8N4W9 903 aaPredicted RBP25.61■■□□□ 1.69
CHFR-218ENST00000540963 STT3BQ8TCJ2 826 aa25.61■■□□□ 1.69
CHFR-218ENST00000540963 ASZ1Q8WWH4 475 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms