RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 S100PP25815 95 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 GRK5P34947 590 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CTSKP43235 329 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CASP6P55212 293 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SCN1BQ07699 218 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CBLBQ13191 982 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ALKBH1Q13686 389 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SLC35F1Q5T1Q4 408 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF691Q5VV52 312 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ANKRD34AQ69YU3 496 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 VASNQ6EMK4 673 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 B3GNT8Q7Z7M8 397 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 UBE2J2Q8N2K1 259 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 DNERQ8NFT8 737 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 OR9I1Q8NGQ6 314 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MYLPFQ96A32 169 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 EXOSC8Q96B26 276 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PDLIM5Q96HC4 596 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MCCC1Q96RQ3 725 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 KCNS3Q9BQ31 491 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 TFB2MQ9H5Q4 396 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 GBA2Q9HCG7 927 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 LYARQ9NX58 379 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 AASSQ9UDR5 926 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 VTI1BQ9UEU0 232 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 INVSQ9Y283 1065 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SESN1Q9Y6P5 492 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 A0A0G2JPF8 293 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 KPNA7A9QM74 516 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 HNRNPCL3B7ZW38 293 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 LGALS8O00214 317 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 EIF3DO15371 548 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PRKRAO75569 313 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 WDR47O94967 919 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 DHFRP00374 187 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 POMCP01189 267 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 IFNA4P05014 189 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 HNRNPCL4P0DMR1 293 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 NCK1P16333 377 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CTNNB1P35222 781 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MVKQ03426 396 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 FGL1Q08830 312 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SPP2Q13103 211 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PRKAA1Q13131 559 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CAMK1Q14012 370 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 TRAM2Q15035 370 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PRSS36Q5K4E3 855 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 C1orf220Q5T0J3 134 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 IL31Q6EBC2 164 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 LAIR1Q6GTX8 287 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CES3Q6UWW8 571 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 RASSF6Q6ZTQ3 369 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 GPR155Q7Z3F1 870 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 EMC1Q8N766 993 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ELMO3Q96BJ8 720 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 RDH12Q96NR8 316 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 OR5M11Q96RB7 305 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 NELL2Q99435 816 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 RIT2Q99578 217 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MED18Q9BUE0 208 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SLC25A23Q9BV35 468 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PTDSS2Q9BVG9 487 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MND1Q9BWT6 205 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ITPAQ9BY32 194 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ZCCHC2Q9C0B9 1178 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SRRQ9GZT4 340 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 KCNH6Q9H252 994 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 MROH8Q9H579 483 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ELP3Q9H9T3 547 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 SLC22A11Q9NSA0 550 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 ANKEF1Q9NU02 776 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 THUMPD1Q9NXG2 353 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 NDRG3Q9UGV2 375 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 PURGQ9UJV8 347 aaKnown RBP9.24□□□□□ -0.93
CLIP1-214ENST00000540539 CITO14578 2027 aa9.24□□□□□ -0.93
CLIP1-214ENST00000540539 A0A1W2PRQ8 180 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 A8MXK9 166 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 NOBOXO60393 691 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 SELENOFO60613 162 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 CCNB2O95067 398 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 LYPLA2O95372 231 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 HPRP00739 348 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 H2AFB1P0C5Y9 115 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 H2AFB2P0C5Z0 115 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 COX5BP10606 129 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 CKMT1AP12532 417 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 ITGB8P26012 769 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 C21orf58P58505 322 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 RPL7AP62424 266 aaKnown RBP9.23□□□□□ -0.93
CLIP1-214ENST00000540539 FKBP1BP68106 108 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF252P-AS1Q0IIN9 211 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 C2orf80Q0P641 193 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 ZNF528Q3MIS6 628 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 CST9Q5W186 159 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 SLC25A25Q6KCM7 469 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 XRRA1Q6P2D8 792 aa9.23□□□□□ -0.93
CLIP1-214ENST00000540539 DENND1BQ6P3S1 775 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms