RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SRPX2O60687 465 aaPredicted RBP11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 SUN1O94901 812 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 APOA4P06727 396 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 ADRA1DP25100 572 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 FAM214AQ32MH5 1076 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 TUBB8Q3ZCM7 444 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 AARS2Q5JTZ9 985 aaKnown RBP11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 FCRL6Q6DN72 434 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 FIGLAQ6QHK4 219 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 KIRREL2Q6UWL6 708 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 COX15Q7KZN9 410 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 NLRP9Q7RTR0 991 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 PEX26Q7Z412 305 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 KCNMB4Q86W47 210 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 FAM20CQ8IXL6 584 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 TTC29Q8NA56 475 aaPredicted RBP11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 OR4L1Q8NH43 312 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 LHPPQ9H008 270 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 EPS8L2Q9H6S3 715 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 REXO2Q9Y3B8 237 aaKnown RBP11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 KLK4Q9Y5K2 254 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 POLEQ07864 2286 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 SLCO2B1O94956 709 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 EDN3P14138 238 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 AOAHP28039 575 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 FDFT1P37268 417 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 CSE1LP55060 971 aaKnown RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 PER3P56645 1201 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 PRAMEP78395 509 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF169Q14929 603 aaPredicted RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 TMED2Q15363 201 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 TLR1Q15399 786 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 SF1Q15637 639 aaKnown RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 HIF1AQ16665 826 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 FASTKD1Q53R41 847 aaKnown RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 TTC23LQ6PF05 361 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 PPP1R21Q6ZMI0 780 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF534Q76KX8 674 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 VRK3Q8IV63 474 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 TMEM151BQ8IW70 566 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 RAB42Q8N4Z0 105 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 OR6P1Q8NGX9 317 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 HMGCLL1Q8TB92 370 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 DNAJB14Q8TBM8 379 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 FAR1Q8WVX9 515 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 RAD51AP1Q96B01 352 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 IL17FQ96PD4 163 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 SELENOSQ9BQE4 189 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 FRMD8P1Q9BZ68 369 aaPredicted RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 SLC2A6Q9UGQ3 507 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 SLC39A10Q9ULF5 831 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 R3HDM2Q9Y2K5 976 aaKnown RBP11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
CBX3P4-202ENST00000540428 PCM1Q15154 2024 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 E2F3O00716 465 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 PRMT5O14744 637 aaPredicted RBP11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 KPNA5O15131 536 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 PRICKLE3O43900 615 aaPredicted RBP11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 CARSP49589 748 aaKnown RBP11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 TTPAP49638 278 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 MFAP5Q13361 173 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 RBBP7Q16576 425 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 PRMT9Q6P2P2 845 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 ISLR2Q6UXK2 745 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 RAD9BQ6WBX8 426 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 LMNTD1Q8N9Z9 388 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 OR11G2Q8NGC1 345 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 CFAP61Q8NHU2 1237 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 LKAAEAR1Q8TD35 194 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 GRHL3Q8TE85 626 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 ZNF778Q96MU6 729 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 PANX3Q96QZ0 392 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 LMF1Q96S06 567 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 SOX17Q9H6I2 414 aaPredicted RBP11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 ETNK1Q9HBU6 452 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 CTSFQ9UBX1 484 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 ANAPC5Q9UJX4 755 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 TCAF1Q9Y4C2 921 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 FAM169AQ9Y6X4 670 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
CBX3P4-202ENST00000540428 PRRC2CQ9Y520 2896 aaKnown RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 HYKKA2RU49 373 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 IQCF5A8MTL0 148 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 E7EVH7 732 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 HPP00738 406 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 MCM3P25205 808 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 GRIA3P42263 894 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 OR1D4P47884 311 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 CDC16Q13042 620 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 SEMA3AQ14563 771 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 NAA25Q14CX7 972 aa11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 OASLQ15646 514 aaKnown RBP11.48□□□□□ -0.57
CBX3P4-202ENST00000540428 WASHC2DQ5SRD0 308 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms