RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TLL1O43897 1013 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 HS6ST1O60243 411 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 FZD6O60353 706 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 C4BPAP04003 597 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ALDOCP09972 364 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RPS3P23396 243 aaKnown RBP eCLIP9.26□□□□□ -0.935e-8■■□□□ 12.8
CTNNA1-243ENST00000540387 RPL9P32969 192 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 GRK5P34947 590 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 CCT3P49368 545 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ATP4BP51164 291 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 KIF19Q2TAC6 998 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 DCAF4L1Q3SXM0 396 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 SPATS1Q496A3 300 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ZMAT1Q5H9K5 638 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 HABP4Q5JVS0 413 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF540Q8NDQ6 660 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 FRS2Q8WU20 508 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 PCNPQ8WW12 178 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ASB15Q8WXK1 588 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 PPIL3Q9H2H8 161 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ING3Q9NXR8 418 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 XPR1Q9UBH6 696 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC39A10Q9ULF5 831 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 FRMPD3Q5JV73 1810 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 LOC100506127A0A0U1RQW1 187 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 APOL1O14791 398 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 NUPL2O15504 423 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 POLBP06746 335 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RAB3AP20336 220 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 SAT1P21673 171 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 CHMP24386 653 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 MAOBP27338 520 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 TNFSF8P32971 234 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 TIE1P35590 1138 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RPL35P42766 123 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 DAB2P98082 770 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR68Q15743 365 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 FUT11Q495W5 492 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 ANKRD33Q7Z3H0 272 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 CDH26Q8IXH8 852 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 SGTBQ96EQ0 304 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RBM4BQ9BQ04 359 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 KCNS3Q9BQ31 491 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RBM4Q9BWF3 364 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 PIF1Q9H611 641 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 LRRC4Q9HBW1 653 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 PCDHB16Q9NRJ7 776 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 C3orf18Q9UK00 162 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 RPS10-NUDT3A0A1W2PQS6 291 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 MEIS3P2A8K0S8 358 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 KATNA1O75449 491 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 PAPSS2O95340 614 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 CSF2P04141 144 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 CYP11A1P05108 521 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 SELPP16109 830 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 AZGP1P25311 298 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 HNF1BP35680 557 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 AP1S2P56377 157 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 ERVFC1P60507 584 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 IL18R1Q13478 541 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 GPNMBQ14956 572 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 SMN1Q16637 294 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 HKDC1Q2TB90 917 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 RAB6CQ53S08 254 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 LRFN4Q6PJG9 635 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 KDELC1Q6UW63 502 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 LARP4Q71RC2 724 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 LRRC8DQ7L1W4 858 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 P3H2Q8IVL5 708 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 NSMCE2Q96MF7 247 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR137Q96N19 417 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 PPP1R2P1Q96PQ5 205 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 NAT9Q9BTE0 207 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 TRIM54Q9BYV2 358 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF518BQ9C0D4 1074 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 RAB6CQ9H0N0 254 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC6A15Q9H2J7 730 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 CD274Q9NZQ7 290 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 KLK14Q9P0G3 267 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 EMC3Q9P0I2 261 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 A0A1W2PP18 115 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 F8W036 122 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 M0R082 166 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC16A6O15403 523 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 GMDSO60547 372 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 ERN1O75460 977 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 RECQL4O94761 1208 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 NFICP08651 508 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 SERPINF2P08697 491 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 RAP2AP10114 183 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 EN2P19622 333 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 PRKACGP22612 351 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 AVPR1AP37288 418 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 AKR1D1P51857 326 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 CCL23P55773 120 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 HOXC5Q00444 222 aa9.25□□□□□ -0.93
CTNNA1-243ENST00000540387 FOXM1Q08050 763 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms