RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 KIAA0355O15063 1070 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TULP3O75386 442 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PSIP1O75475 530 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SNX4O95219 450 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MAGEA12P43365 314 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 LEPRP48357 1165 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 RXRGP48443 463 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CDH12P55289 794 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PIGFQ07326 219 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CES4AQ5XG92 561 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CYP20A1Q6UW02 462 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 KLHDC8BQ8IXV7 354 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 DMRTB1Q96MA1 342 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MUS81Q96NY9 551 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CGREF1Q99674 301 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 OLFM1Q99784 485 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CD84Q9UIB8 345 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ADAM30Q9UKF2 790 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CDC14AQ9UNH5 594 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF510Q9Y2H8 683 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 LRRC14BA6NHZ5 514 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TNFRSF11BO00300 401 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MAGEB3O15480 346 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PDE9AO76083 593 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 FABP3P05413 133 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 NR2F6P10588 404 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 LBX1P52954 281 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ITGA1P56199 1179 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CHIT1Q13231 466 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TAF1AQ15573 450 aaPredicted RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ATAD3BQ5T9A4 648 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 FBXL19Q6PCT2 694 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 FAM131AQ6UXB0 335 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MTSS1LQ765P7 747 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SERPINA9Q86WD7 417 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 STARD8Q92502 1023 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TMIGD2Q96BF3 282 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ART5Q96L15 291 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 NSUN5Q96P11 429 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 COPS4Q9BT78 406 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ZBP1Q9H171 429 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ACTR3BQ9P1U1 418 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 KIAA1522Q9P206 1035 aaPredicted RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PTGFRNQ9P2B2 879 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ITGB1BP2Q9UKP3 347 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SPO11Q9Y5K1 396 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PMF1-BGLAPU3KQ54 211 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 HAT1O14929 419 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CD36P16671 472 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 IL18R1Q13478 541 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 DNASE1L3Q13609 305 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PDE12Q6L8Q7 609 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CXorf57Q6NSI4 855 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TRIM40Q6P9F5 258 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 PLET1Q6UQ28 207 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MACC1Q6ZN28 852 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 GAREM2Q75VX8 874 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CLEC14AQ86T13 490 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 TMPRSS11BQ86T26 416 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF671Q8TAW3 534 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SH3RF2Q8TEC5 729 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 XAGE5Q8WWM1 108 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 GATA6Q92908 595 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 BIRC7Q96CA5 298 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 KLHL32Q96NJ5 620 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SMIM14Q96QK8 99 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 DNAJB9Q9UBS3 223 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SSR3Q9UNL2 185 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SLC9A8Q9Y2E8 581 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MROH6A6NGR9 719 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ANKRD66B4E2M5 251 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 H3BNC9 293 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 BOLA2-SMG1P6H3BVE0 249 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 K7ERQ8 282 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SGTAO43765 313 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 AP2A2O94973 939 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 S1PR4O95977 384 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ITGA2P17301 1181 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SYN1P17600 705 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ELK4P28324 431 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 BUD31P41223 144 aaPredicted RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 NUDT6P53370 316 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 RPS14P62263 151 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ARF5P84085 180 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SULT2A1Q06520 285 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 LSAMPQ13449 338 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 NPTX1Q15818 432 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 C5orf22Q49AR2 442 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 C6orf183Q5T699 404 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MYO19Q96H55 970 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 MUC13Q9H3R2 512 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 KAT8Q9H7Z6 458 aaKnown RBP9.75□□□□□ -0.85
TRAF1-202ENST00000540010 SGK2Q9HBY8 427 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CTPS2Q9NRF8 586 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 GIN1Q9NXP7 522 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms