RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ING2Q9H160 280 aa16.12■□□□□ 0.17
DDB1-215ENST00000539712 CLMPQ9H6B4 373 aa16.12■□□□□ 0.17
DDB1-215ENST00000539712 TRMT1Q9NXH9 659 aaKnown RBP16.12■□□□□ 0.17
DDB1-215ENST00000539712 DHCR7Q9UBM7 475 aaKnown RBP16.12■□□□□ 0.17
DDB1-215ENST00000539712 KLK4Q9Y5K2 254 aa16.12■□□□□ 0.17
DDB1-215ENST00000539712 CCDC88CQ9P219 2028 aa16.12■□□□□ 0.17
DDB1-215ENST00000539712 LRRK2Q5S007 2527 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 ARGFXA6NJG6 315 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 H3BMM5 538 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 CES2O00748 559 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 CTSVO60911 334 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 CEACAM4O75871 244 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 PKMP14618 531 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 PSMB5P28074 263 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 FNTAP49354 379 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 FOXL2P58012 376 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 CTBP1Q13363 440 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 FASTKQ14296 549 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 SF1Q15637 639 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 CYP2A13Q16696 494 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 RNASEH2BQ5TBB1 312 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 ZNF470Q6ECI4 717 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 TLDC1Q6P9B6 456 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 CNSTQ6PJW8 725 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 FIGLAQ6QHK4 219 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 ASB18Q6ZVZ8 466 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 OR2A1Q8NGT9 310 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 GIMAP7Q8NHV1 300 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 N4BP2L2Q92802 583 aaPredicted RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 SLC22A18Q96BI1 424 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 ZNF669Q96BR6 464 aaPredicted RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 INTS10Q9NVR2 710 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 SLC39A10Q9ULF5 831 aa16.11■□□□□ 0.17
DDB1-215ENST00000539712 TNRC6AQ8NDV7 1962 aaKnown RBP16.11■□□□□ 0.17
DDB1-215ENST00000539712 USP27XA6NNY8 438 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 ARHGEF33A8MVX0 844 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 KIF5CO60282 957 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 NRP2O60462 931 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 ERGP11308 486 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 PAMP19021 973 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 CHRM3P20309 590 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 AGXTP21549 392 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 CCNFP41002 786 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 DCDP81605 110 aaKnown RBP16.1■□□□□ 0.17
DDB1-215ENST00000539712 KLRB1Q12918 225 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 PAPD7Q5XG87 772 aaKnown RBP16.1■□□□□ 0.17
DDB1-215ENST00000539712 MRPL14Q6P1L8 145 aaKnown RBP16.1■□□□□ 0.17
DDB1-215ENST00000539712 GSDMBQ8TAX9 411 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 PROKR1Q8TCW9 393 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 SKA2Q8WVK7 121 aaPredicted RBP16.1■□□□□ 0.17
DDB1-215ENST00000539712 DHRS4Q9BTZ2 278 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 RAB11FIP5Q9BXF6 653 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 SLC7A5P2Q9GIP4 190 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 TSR3Q9UJK0 312 aaKnown RBP16.1■□□□□ 0.17
DDB1-215ENST00000539712 PTPN13Q12923 2485 aa16.1■□□□□ 0.17
DDB1-215ENST00000539712 ANKRD12Q6UB98 2062 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 TARM1B6A8C7 271 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 PSIP1O75475 530 aaKnown RBP16.09■□□□□ 0.17
DDB1-215ENST00000539712 USP1O94782 785 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 ONECUT2O95948 504 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 MCM3P25205 808 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 IVDP26440 423 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 CCL11P51671 97 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 FOXK1P85037 733 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 IGFBP7Q16270 282 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 KLHL38Q2WGJ6 581 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 NKAIN1Q4KMZ8 207 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 MLIPQ5VWP3 458 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 TTC23LQ6PF05 361 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 CYHR1Q6ZMK1 362 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 PPIL6Q8IXY8 311 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 OR2L3Q8NG85 312 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 ZUFSPQ96AP4 578 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 DDX47Q9H0S4 455 aaKnown RBP16.09■□□□□ 0.17
DDB1-215ENST00000539712 FBXO6Q9NRD1 293 aaPredicted RBP16.09■□□□□ 0.17
DDB1-215ENST00000539712 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.09■□□□□ 0.17
DDB1-215ENST00000539712 SRPK3Q9UPE1 567 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 PCDHGA9Q9Y5G4 932 aaKnown RBP16.09■□□□□ 0.17
DDB1-215ENST00000539712 FAM169AQ9Y6X4 670 aa16.09■□□□□ 0.17
DDB1-215ENST00000539712 USP9XQ93008 2570 aaPredicted RBP16.08■□□□□ 0.17
DDB1-215ENST00000539712 FITM1A5D6W6 292 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 C9J4A7 227 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 MYO1CO00159 1063 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 PFDN6O15212 129 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 FKBP9O95302 570 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 MED26O95402 600 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 UMODP07911 640 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 SLC1A2P43004 574 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 TIAL1Q01085 375 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDB1-215ENST00000539712 ATP1A4Q13733 1029 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 SLC9A5Q14940 896 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 LONRF1Q17RB8 773 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 MSS51Q4VC12 460 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 OR9A1PQ8NGU1 263 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 SLCO2A1Q92959 643 aa16.08■□□□□ 0.16
DDB1-215ENST00000539712 FOPNLQ96NB1 174 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms