RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CYB5D2Q8WUJ1 264 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 MYLIPQ8WY64 445 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 PYCR2Q96C36 320 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 ITCHQ96J02 903 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 FADS3Q9Y5Q0 445 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 WNT6Q9Y6F9 365 aa17.44■□□□□ 0.38
GNE-204ENST00000539208 FADS2P1A8MWK0 482 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 H0YAE9 185 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 XYLBO75191 536 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 HOXB9P17482 250 aaPredicted RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 HOXB6P17509 224 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 NELFEP18615 380 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 NRIP1P48552 1158 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 DYNC1I2Q13409 638 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 USP51Q70EK9 711 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 NECAB2Q7Z6G3 386 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 KLHDC8AQ8IYD2 350 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CLHC1Q8NHS4 586 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 SPPL3Q8TCT6 385 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 MAGEE2Q8TD90 523 aaPredicted RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 ADAMTS16Q8TE57 1224 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 POF1BQ8WVV4 589 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 SORCS1Q8WY21 1168 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 FIG4Q92562 907 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 NMD3Q96D46 503 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 ZSWIM3Q96MP5 696 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 RAD9AQ99638 391 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 ADGRE2Q9UHX3 823 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 INVSQ9Y283 1065 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 PCDHB14Q9Y5E9 798 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 NOTCH4Q99466 2003 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 FAM220BPB1ANY3 271 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 MT-ND1P03886 318 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 ASLP04424 464 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 RETP07949 1114 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 AMD1P17707 334 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 SDC1P18827 310 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 ADARB1P78563 741 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 PCDH1Q08174 1060 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CSTF3Q12996 717 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 ZNF284Q2VY69 593 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 PATL1Q86TB9 770 aaKnown RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 MICU2Q8IYU8 434 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CSGALNACT1Q8TDX6 532 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CYGBQ8WWM9 190 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 ATL1Q8WXF7 558 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CPPED1Q9BRF8 314 aaPredicted RBP17.43■□□□□ 0.38
GNE-204ENST00000539208 PCDHGA11Q9Y5H2 935 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 CEPT1Q9Y6K0 416 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 V9GYQ6 96 aa17.43■□□□□ 0.38
GNE-204ENST00000539208 A0A087WXM4 84 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 C16orf96A6NNT2 1141 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 CXCR6O00574 342 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 CISD3P0C7P0 127 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 IL1RNP18510 177 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 XPAP23025 273 aaPredicted RBP17.42■□□□□ 0.38
GNE-204ENST00000539208 ITPKAP23677 461 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 CTNNB1P35222 781 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 MAPK9P45984 424 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 GZMMP51124 257 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 CHIT1Q13231 466 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
GNE-204ENST00000539208 RAVER1Q8IY67 606 aaKnown RBP17.42■□□□□ 0.38
GNE-204ENST00000539208 NRSN1Q8IZ57 195 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 TMEM132CQ8N3T6 1108 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 GLMNQ92990 594 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 APIPQ96GX9 242 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 YTHDF1Q9BYJ9 559 aaKnown RBP17.42■□□□□ 0.38
GNE-204ENST00000539208 PCDH10Q9P2E7 1040 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 HCFC2Q9Y5Z7 792 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 MAP4P27816 1152 aaKnown RBP17.42■□□□□ 0.38
GNE-204ENST00000539208 PTPN6P29350 595 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 MMP12P39900 470 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 HALP42357 657 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 ALDH3A2P51648 485 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 TBPL2Q6SJ96 375 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 ABRAXAS1Q6UWZ7 409 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 CYP2U1Q7Z449 544 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 GPR149Q86SP6 731 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 KIAA1958Q8N8K9 716 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 WFIKKN2Q8TEU8 576 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 GLYATL1Q969I3 302 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 METTL2AQ96IZ6 378 aaKnown RBP17.42■□□□□ 0.38
GNE-204ENST00000539208 CCDC138Q96M89 665 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 ATG10Q9H0Y0 220 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 SLC6A13Q9NSD5 602 aa17.42■□□□□ 0.38
GNE-204ENST00000539208 OR2AG2A6NM03 316 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 ARHGEF33A8MVX0 844 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 PSMD11O00231 422 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 PRMT3O60678 531 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 ATG13O75143 517 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 HPRP00739 348 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 CDH2P19022 906 aaPredicted RBP17.41■□□□□ 0.38
GNE-204ENST00000539208 TACR1P25103 407 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 PRLHRP49683 370 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 ARSFP54793 590 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 NTHL1P78549 312 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 UBE3AQ05086 875 aa17.41■□□□□ 0.38
GNE-204ENST00000539208 PPIGQ13427 754 aaKnown RBP eCLIP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms