RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 OR2L8Q8NGY9 312 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 C1orf54Q8WWF1 131 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 INPP5DQ92835 1189 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 SLC22A18Q96BI1 424 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 P2RY12Q9H244 342 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 WDR54Q9H977 334 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 ENAMQ9NRM1 1142 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 CATSPERZQ9NTU4 200 aa12.01□□□□□ -0.49
VAMP1-206ENST00000538970 MARCH4Q9P2E8 410 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-206ENST00000538970 PRMT5O14744 637 aaPredicted RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 IPO13O94829 963 aaKnown RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 ONECUT2O95948 504 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 APRTP07741 180 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ALAS2P22557 587 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 MMP11P24347 488 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 TTPAP49638 278 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 NR6A1Q15406 480 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ZC3H12BQ5HYM0 836 aaKnown RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 COX15Q7KZN9 410 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 RNF10Q8N5U6 811 aaKnown RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 CCDC89Q8N998 374 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 PRR7Q8TB68 274 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 TM9SF4Q92544 642 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 NACC2Q96BF6 587 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ZNF285Q96NJ3 590 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 SPSB2Q99619 263 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 RAB11FIP5Q9BXF6 653 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ILKAPQ9H0C8 392 aaPredicted RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 SLC26A1Q9H2B4 701 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ZBTB20Q9HC78 741 aaPredicted RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 CHRAC1Q9NRG0 131 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 TREX1Q9NSU2 369 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 CUTCQ9NTM9 273 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 INTS7Q9NVH2 962 aaKnown RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 ASF1BQ9NVP2 202 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12□□□□□ -0.49
VAMP1-206ENST00000538970 PAK5Q9P286 719 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 FBXL4Q9UKA2 621 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 OTOGQ6ZRI0 2925 aa12□□□□□ -0.49
VAMP1-206ENST00000538970 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 FITM1A5D6W6 292 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SOCS6O14544 535 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 DSCR3O14972 297 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CD3EAPO15446 510 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PRICKLE3O43900 615 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ALOX12BO75342 701 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 FKBP9O95302 570 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CBX6O95503 412 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 DDAH2O95865 285 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ALBP02768 609 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ZSCAN5DPP0CG00 497 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 MCM3P25205 808 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ITGA3P26006 1051 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 RPL22P35268 128 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 GRIA3P42263 894 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 BDKRB1P46663 353 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 AIMP2Q13155 320 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SNX1Q13596 522 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 GRM7Q14831 915 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SF1Q15637 639 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 NKG7Q16617 165 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CCSMST1Q4G0I0 132 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CRB2Q5IJ48 1285 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 TCTE1Q5JU00 501 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PCID2Q5JVF3 399 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 YOD1Q5VVQ6 348 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PTRHD1Q6GMV3 140 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 FIGLAQ6QHK4 219 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 Q6ZS92 163 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 OVCH1Q7RTY7 1134 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CUZD1Q86UP6 607 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 TICAM1Q8IUC6 712 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SRRM1Q8IYB3 904 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 MPP5Q8N3R9 675 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ZADH2Q8N4Q0 377 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CISD2Q8N5K1 135 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PANX3Q96QZ0 392 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SELENOSQ9BQE4 189 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SLC6A20Q9NP91 592 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 EIF2B3Q9NR50 452 aaKnown RBP11.99□□□□□ -0.49
VAMP1-206ENST00000538970 GNPTGQ9UJJ9 305 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 CDC23Q9UJX2 597 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 SLC39A10Q9ULF5 831 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 NFS1Q9Y697 457 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 PCM1Q15154 2024 aa11.99□□□□□ -0.49
VAMP1-206ENST00000538970 KRT87PA6NCN2 255 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 TARM1B6A8C7 271 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 CTSVO60911 334 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 C1orf105O95561 183 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 CLDN1O95832 211 aa11.98□□□□□ -0.49
VAMP1-206ENST00000538970 PIM1P11309 404 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 RPS3P23396 243 aaKnown RBP eCLIP11.98□□□□□ -0.49
VAMP1-206ENST00000538970 ELAVL4P26378 380 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms