RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TMEM26Q6ZUK4 368 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 ADHFE1Q8IWW8 467 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 MSRB3Q8IXL7 192 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 RGL4Q8IZJ4 473 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 FAM9CQ8IZT9 166 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 CLDN19Q8N6F1 224 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 FBXO30Q8TB52 745 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 NRBF2Q96F24 287 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 SLC47A1Q96FL8 570 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 RBM4BQ9BQ04 359 aaKnown RBP14.19□□□□□ -0.14
CDCA3-207ENST00000538862 RBM4Q9BWF3 364 aaKnown RBP14.19□□□□□ -0.14
CDCA3-207ENST00000538862 CARS2Q9HA77 564 aaKnown RBP14.19□□□□□ -0.14
CDCA3-207ENST00000538862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.19□□□□□ -0.14
CDCA3-207ENST00000538862 FAM118AQ9NWS6 357 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 C1orf109Q9NX04 203 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 SLC25A37Q9NYZ2 338 aa14.19□□□□□ -0.14
CDCA3-207ENST00000538862 TRBV5-3A0A0A0MS03 114 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 LOC730098B7Z3J9 87 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 CXCR6O00574 342 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 ERN1O75460 977 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 RFPL2O75678 378 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 STK16O75716 305 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 BPIP17213 487 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 CRHBPP24387 322 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 EEF1B2P24534 225 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 SHMT2P34897 504 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 POLR2IP36954 125 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 PLD1Q13393 1074 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 CDH18Q13634 790 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 NEDD8Q15843 81 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 USP39Q53GS9 565 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 GPR149Q86SP6 731 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 PLPP6Q8IY26 295 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 MICU2Q8IYU8 434 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 ZNF555Q8NEP9 628 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 FAM162AQ96A26 154 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 ULK4Q96C45 1275 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 MAGED4Q96JG8 741 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 OR52E6Q96RD3 313 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 C2orf49Q9BVC5 232 aaPredicted RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 TOR3AQ9H497 397 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 ACTR8Q9H981 624 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 FARSBQ9NSD9 589 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 DCAF13Q9NV06 445 aaKnown RBP14.18□□□□□ -0.14
CDCA3-207ENST00000538862 DZANK1Q9NVP4 752 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 INVSQ9Y283 1065 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 PIKFYVEQ9Y2I7 2098 aa14.18□□□□□ -0.14
CDCA3-207ENST00000538862 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 FAM220BPB1ANY3 271 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 K7ERQ8 282 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CLDN7O95471 211 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CLDN9O95484 217 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KRT6AP02538 564 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KRT6BP04259 564 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 GSTM2P28161 218 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 HNF1BP35680 557 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 SPAM1P38567 509 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KRT6CP48668 564 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 GABARAPL2P60520 117 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 HMGCS1Q01581 520 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 NKG7Q16617 165 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 ZNF829Q3KNS6 432 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CES5AQ6NT32 575 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 ELMSAN1Q6PJG2 1045 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CALHM3Q86XJ0 350 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 NXPE1Q8N323 547 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 FAM86B1Q8N7N1 296 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 ACDQ96AP0 544 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 TM6SF2Q9BZW4 377 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 IKZF5Q9H5V7 419 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KAT8Q9H7Z6 458 aaKnown RBP14.17□□□□□ -0.14
CDCA3-207ENST00000538862 ZFP14Q9HCL3 533 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 KCTD5Q9NXV2 234 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 EVLQ9UI08 416 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-207ENST00000538862 MAN2B2Q9Y2E5 1009 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 MAGED1Q9Y5V3 778 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-207ENST00000538862 MYO10Q9HD67 2058 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 A0A1W2PPW3 197 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 GNGT2O14610 69 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 GREM1O60565 184 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 BCKDHAP12694 445 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 UGT1A1P22309 533 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 UGT1A4P22310 534 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 UGT1A3P35503 534 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 UGT1A5P35504 534 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 NSG1P42857 185 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CLDN8P56748 225 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 RAB15P59190 212 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 TMED1Q13445 227 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 TOP3AQ13472 1001 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CHRNA6Q15825 494 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 LRIF1Q5T3J3 769 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 SUSD1Q6UWL2 747 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 Q6ZNB5 142 aa14.17□□□□□ -0.14
CDCA3-207ENST00000538862 CHST15Q7LFX5 561 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms